RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 DDX43Q9NXZ2 648 aaKnown RBP17.99■□□□□ 0.47
CCNF-203ENST00000564236 ABI2Q9NYB9 513 aaPredicted RBP17.99■□□□□ 0.47
CCNF-203ENST00000564236 NUP210Q8TEM1 1887 aaPredicted RBP17.99■□□□□ 0.47
CCNF-203ENST00000564236 GPR179Q6PRD1 2367 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 WDR87Q6ZQQ6 2873 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 SPECC1L-ADORA2AF8WAN1 911 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 DPYSL4O14531 572 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 CUTAO60888 179 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 CSH1P0DML2 217 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 CSH2P0DML3 217 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 LHX1P48742 406 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 SNRPFP62306 86 aaKnown RBP17.98■□□□□ 0.47
CCNF-203ENST00000564236 CYP4F8P98187 520 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 GAS6Q14393 721 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 SURF1Q15526 300 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 WDR44Q5JSH3 913 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 SCARA3Q6AZY7 606 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 SHC4Q6S5L8 630 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 SPEM1Q8N4L4 309 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 CELF5Q8N6W0 485 aaKnown RBP17.98■□□□□ 0.47
CCNF-203ENST00000564236 IQUBQ8NA54 791 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 GLIS3Q8NEA6 775 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 ZNF507Q8TCN5 953 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 FAM200AQ8TCP9 573 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 FUBP3Q96I24 572 aaKnown RBP eCLIP17.98■□□□□ 0.47
CCNF-203ENST00000564236 C7orf25Q9BPX7 421 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 MTMR12Q9C0I1 747 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 MAGEF1Q9HAY2 307 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 CACNA1AO00555 2505 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 TICRRQ7Z2Z1 1910 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 UBE4BO95155 1302 aa17.98■□□□□ 0.47
CCNF-203ENST00000564236 DMXL1Q9Y485 3027 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 GOLGA8IPA6NC78 632 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 ZNF233A6NK53 670 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 GOLGA8JA6NMD2 632 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 NOL4O94818 638 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 MYL7Q01449 175 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 CCINQ13939 588 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 LRRC32Q14392 662 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 ZNF268Q14587 947 aaPredicted RBP17.97■□□□□ 0.47
CCNF-203ENST00000564236 SOWAHAQ2M3V2 549 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 DGKKQ5KSL6 1271 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 FAM171BQ6P995 826 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 TXNDC11Q6PKC3 985 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 TSSK4Q6SA08 328 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 SYNPOQ8N3V7 929 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 GPR161Q8N6U8 529 aaKnown RBP17.97■□□□□ 0.47
CCNF-203ENST00000564236 GIPC2Q8TF65 315 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 ANKRD36BP1Q96IX9 119 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 CEP295NLQ96MC4 621 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 FAM83CQ9BQN1 747 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 PCIF1Q9H4Z3 704 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 KIF9Q9HAQ2 790 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 GTSE1Q9NYZ3 720 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 UXTQ9UBK9 157 aaPredicted RBP17.97■□□□□ 0.47
CCNF-203ENST00000564236 PTPRJQ12913 1337 aa17.97■□□□□ 0.47
CCNF-203ENST00000564236 SLC38A8A6NNN8 435 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 TGFB1I1O43294 461 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 TMEM191BP0C7N4 346 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 PCSK1P29120 753 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 HOXA6P31267 233 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 KPNA1P52294 538 aaPredicted RBP17.96■□□□□ 0.47
CCNF-203ENST00000564236 RPL10AP62906 217 aaKnown RBP17.96■□□□□ 0.47
CCNF-203ENST00000564236 TAF12Q16514 161 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 DUOXA2Q1HG44 320 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 ATL3Q6DD88 541 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 MON1AQ86VX9 555 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 OSTM1Q86WC4 334 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 CBWD2Q8IUF1 395 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 WDR49Q8IV35 697 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 ADGRF2Q8IZF7 708 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 OR5B17Q8NGF7 314 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 PI4K2AQ9BTU6 479 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 FOXD4L1Q9NU39 408 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 THG1LQ9NWX6 298 aaKnown RBP17.96■□□□□ 0.47
CCNF-203ENST00000564236 HSPBP1Q9NZL4 362 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 SMG5Q9UPR3 1016 aaKnown RBP17.96■□□□□ 0.47
CCNF-203ENST00000564236 SNX9Q9Y5X1 595 aa17.96■□□□□ 0.47
CCNF-203ENST00000564236 KIF26AQ9ULI4 1882 aaPredicted RBP17.96■□□□□ 0.47
CCNF-203ENST00000564236 PRPF40AO75400 957 aaKnown RBP17.95■□□□□ 0.46
CCNF-203ENST00000564236 TADA3O75528 432 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 FAM163BP0C2L3 166 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 MAGEA11P43364 429 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 CXCL12P48061 93 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 SOX9P48436 509 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 BFSP1Q12934 665 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 MYO1EQ12965 1108 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 BMT2Q1RMZ1 405 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 FAM26FQ5R3K3 315 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 UNC13DQ70J99 1090 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 KIAA2013Q8IYS2 634 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 KBTBD7Q8WVZ9 684 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 USP13Q92995 863 aaPredicted RBP17.95■□□□□ 0.46
CCNF-203ENST00000564236 HPS3Q969F9 1004 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 RMDN1Q96DB5 314 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 ZFYVE19Q96K21 471 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 FAM84AQ96KN4 292 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 AGPAT3Q9NRZ7 376 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 TDP1Q9NUW8 608 aa17.95■□□□□ 0.46
CCNF-203ENST00000564236 DLL3Q9NYJ7 618 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms