RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 RIN2Q8WYP3 895 aaPredicted RBP20.2■□□□□ 0.82
SYNGR3-203ENST00000563869 SNX25Q9H3E2 840 aa20.2■□□□□ 0.82
SYNGR3-203ENST00000563869 MFSD1Q9H3U5 465 aa20.2■□□□□ 0.82
SYNGR3-203ENST00000563869 RXFP1Q9HBX9 757 aa20.2■□□□□ 0.82
SYNGR3-203ENST00000563869 DMDP11532 3685 aa20.2■□□□□ 0.82
SYNGR3-203ENST00000563869 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 LGALS16A8MUM7 142 aa20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 BRCC3P46736 316 aa20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 TSPY1Q01534 308 aa20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 VARS2Q5ST30 1063 aaKnown RBP20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 CD300LGQ6UXG3 332 aa20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 UNC93AQ86WB7 457 aa20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 DCP1BQ8IZD4 617 aaKnown RBP20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 ADGRF2Q8IZF7 708 aa20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 C2orf15Q8WU43 125 aaKnown RBP20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 BCL7CQ8WUZ0 217 aaPredicted RBP20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 NKD2Q969F2 451 aaPredicted RBP20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 TNIP3Q96KP6 325 aa20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 ACBD6Q9BR61 282 aa20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 MTRRQ9UBK8 725 aa20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 NXF1Q9UBU9 619 aaKnown RBP20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 SPTBN4Q9H254 2564 aa20.19■□□□□ 0.82
SYNGR3-203ENST00000563869 PTPRZ1P23471 2315 aaPredicted RBP20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 EPCAMP16422 314 aa20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 WARSP23381 471 aaKnown RBP20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 MRPL58Q14197 206 aaKnown RBP20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 PTPN14Q15678 1187 aa20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 CTXN3Q4LDR2 81 aa20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 MIIPQ5JXC2 388 aa20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 TPGS2Q68CL5 300 aa20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 LIMS2Q7Z4I7 341 aa20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 HDAC7Q8WUI4 952 aa20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 RABGGTAQ92696 567 aa20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 BCO2Q9BYV7 579 aa20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 HSFX1Q9UBD0 423 aa20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 CACNG4Q9UBN1 327 aa20.18■□□□□ 0.82
SYNGR3-203ENST00000563869 PPEF2O14830 753 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 TKTP29401 623 aaKnown RBP20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 MFAP3P55082 362 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 NFE2Q16621 373 aaPredicted RBP20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 HSP90AA4PQ58FG1 418 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 SLC8B1Q6J4K2 584 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 TRIM65Q6PJ69 517 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 PDCL2Q8N4E4 241 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 LNX1Q8TBB1 728 aaPredicted RBP20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 SLC22A17Q8WUG5 538 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 AUTS2Q8WXX7 1259 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 VPS16Q9H269 839 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 PLCB1Q9NQ66 1216 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 TAB2Q9NYJ8 693 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 APEX2Q9UBZ4 518 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 FBXL5Q9UKA1 691 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 CDH9Q9ULB4 789 aa20.17■□□□□ 0.82
SYNGR3-203ENST00000563869 GABRDO14764 452 aa20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 SPTLC1O15269 473 aa20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 GNL1P36915 607 aaPredicted RBP20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 UBXN1Q04323 297 aa20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 SOWAHAQ2M3V2 549 aa20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 UVSSAQ2YD98 709 aa20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 RTP2Q5QGT7 225 aa20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 CWF19L1Q69YN2 538 aaKnown RBP20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 ERMP1Q7Z2K6 904 aa20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 ACSF2Q96CM8 615 aaPredicted RBP20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 ERGIC2Q96RQ1 377 aa20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 VN1R3Q9BXE9 311 aa20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 INTS2Q9H0H0 1204 aaKnown RBP20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 HSD3B7Q9H2F3 369 aa20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 FAM186AA6NE01 2351 aa20.16■□□□□ 0.82
SYNGR3-203ENST00000563869 A0A1W2PQC6 194 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 LILRB3O75022 631 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 KLRC2P26717 231 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 UBASH3AP57075 661 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 INCA1Q0VD86 236 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 CUL2Q13617 745 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 RAB33AQ14088 237 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 WSCD1Q658N2 575 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 PPM1KQ8N3J5 372 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 FLCNQ8NFG4 579 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 PLEKHA4Q9H4M7 779 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 DDX43Q9NXZ2 648 aaKnown RBP20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 KIAA1257Q9ULG3 409 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 L1RE1Q9UN81 338 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 ATP8B3O60423 1300 aa20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 RIF1Q5UIP0 2472 aaKnown RBP20.15■□□□□ 0.82
SYNGR3-203ENST00000563869 C2orf16Q68DN1 1984 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 A0A1B0GTH6 734 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 F8W810 466 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 C2CD2LO14523 706 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 AOC1P19801 751 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 PON1P27169 355 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 ASPAP45381 313 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 FANCCQ00597 558 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 TMC5Q6UXY8 1006 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 C4orf50Q6ZRC1 276 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 CCDC149Q6ZUS6 474 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 GPR149Q86SP6 731 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 OR6B3Q8NGW1 331 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 ZNF461Q8TAF7 563 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 LMO3Q8TAP4 145 aa20.14■□□□□ 0.81
SYNGR3-203ENST00000563869 SEMA4DQ92854 862 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms