RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 MIR1-1HGQ9H1L0 117 aa11.81□□□□□ -0.52
HDGFL3-204ENST00000563790 ECHDC1Q9NTX5 307 aa11.81□□□□□ -0.52
HDGFL3-204ENST00000563790 AFF4Q9UHB7 1163 aaKnown RBP11.81□□□□□ -0.52
HDGFL3-204ENST00000563790 CCL26Q9Y258 94 aa11.81□□□□□ -0.52
HDGFL3-204ENST00000563790 SNX11Q9Y5W9 270 aa11.81□□□□□ -0.52
HDGFL3-204ENST00000563790 UBE4BO95155 1302 aa11.81□□□□□ -0.52
HDGFL3-204ENST00000563790 FLNAP21333 2647 aaKnown RBP11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 RP1P56715 2156 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 TMEM189-UBE2V1I3L0A0 370 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 DDX39AO00148 427 aaKnown RBP11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 GJB6O95452 261 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 MT-CO3P00414 261 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 TIE1P35590 1138 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 OPRD1P41143 372 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 DNM2P50570 870 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 ARPP19P56211 112 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 ST3GAL1Q11201 340 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 SART3Q15020 963 aaKnown RBP11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 CATIPQ7Z7H3 387 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 RHPN2Q8IUC4 686 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 KSR1Q8IVT5 923 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 RIN3Q8TB24 985 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 MARVELD3Q96A59 401 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 CCDC51Q96ER9 411 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 MAD2L2Q9UI95 211 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 TNNQ9UQP3 1299 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 YIPF1Q9Y548 306 aa11.8□□□□□ -0.52
HDGFL3-204ENST00000563790 PLXNA2O75051 1894 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 IGKV6-21A0A0C4DH24 114 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 MTSS1O43312 755 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 HNRNPRO43390 633 aaKnown RBP11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 PRKCGP05129 697 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 CT47B1P0C2W7 299 aaPredicted RBP11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 PCP11498 1178 aaKnown RBP11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 AKAP5P24588 427 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 GABRR2P28476 465 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 KIR2DL1P43626 348 aaPredicted RBP11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 CSNK1EP49674 416 aaKnown RBP11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 MORC3Q14149 939 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 ZXDCQ2QGD7 858 aaPredicted RBP11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 CCDC178Q5BJE1 867 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 LCE2DQ5TA82 110 aaPredicted RBP11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 HACE1Q8IYU2 909 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 CMTM8Q8IZV2 173 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 ATP2A3Q93084 1043 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 PRIMPOLQ96LW4 560 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 NLRP4Q96MN2 994 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 MDFIQ99750 246 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 SLC46A2Q9BY10 475 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 NXF3Q9H4D5 531 aaKnown RBP11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 MINDY3Q9H8M7 445 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 KIF9Q9HAQ2 790 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 ZMYM5Q9UJ78 669 aa11.79□□□□□ -0.52
HDGFL3-204ENST00000563790 WDR64B1ANS9 1081 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 H0Y8X5 98 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 ZNF213O14771 459 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 DHX15O43143 795 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 USP12O75317 370 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 OATP04181 439 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 DRD2P14416 443 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 AFF3P51826 1226 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 PLD1Q13393 1074 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 TARBP2Q15633 366 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 ALX1Q15699 326 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 PPP1R26Q5T8A7 1209 aaPredicted RBP11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 TIPARPQ7Z3E1 657 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 SRGAP1Q7Z6B7 1085 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 SFTPA1Q8IWL2 248 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 CADM4Q8NFZ8 388 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 USP13Q92995 863 aaPredicted RBP11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 NRBP2Q9NSY0 501 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 KLK14Q9P0G3 267 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 SUCLA2Q9P2R7 463 aaPredicted RBP11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 TDRD6O60522 2096 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 ZNF106Q9H2Y7 1883 aaKnown RBP11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 SCN8AQ9UQD0 1980 aa11.78□□□□□ -0.52
HDGFL3-204ENST00000563790 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 CYTH3O43739 400 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 TRIM27P14373 513 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 IGFBP6P24592 240 aaPredicted RBP11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 EPHB3P54753 998 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 CYP4F8P98187 520 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 BFSP1Q12934 665 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 NR1H3Q13133 447 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 NAB2Q15742 525 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 NOTUMQ6P988 496 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 SLC46A1Q96NT5 459 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 FUCA2Q9BTY2 467 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 CD93Q9NPY3 652 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 TDP1Q9NUW8 608 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 GABBR1Q9UBS5 961 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 TUBD1Q9UJT1 453 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 ITGB1BP2Q9UKP3 347 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 ANKRD6Q9Y2G4 727 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 CITO14578 2027 aa11.77□□□□□ -0.53
HDGFL3-204ENST00000563790 TLN2Q9Y4G6 2542 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 KCNK3O14649 394 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 TRAPPC3O43617 180 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 DFNA5O60443 496 aa11.76□□□□□ -0.53
HDGFL3-204ENST00000563790 PSAPP07602 524 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms