RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 DPYSL4O14531 572 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 APBB3O95704 486 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 NFICP08651 508 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 HAPLN1P10915 354 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-204ENST00000563739 CYP3A5P20815 502 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 CDC25AP30304 524 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 OPRD1P41143 372 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 ALDH1A3P47895 512 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 ZXDBP98169 803 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 GRSF1Q12849 480 aaKnown RBP eCLIP11.25□□□□□ -0.61
SF3B3-204ENST00000563739 SLC39A12Q504Y0 691 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 SOWAHCQ53LP3 525 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-204ENST00000563739 SPATA1Q5VX52 437 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 TXNDC8Q6A555 127 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 HAUS6Q7Z4H7 955 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 MDGA1Q8NFP4 955 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 SPIRE2Q8WWL2 714 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 KCNN1Q92952 543 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 BBC3Q96PG8 261 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-204ENST00000563739 PNMA5Q96PV4 448 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 SEPT5Q99719 369 aaPredicted RBP11.25□□□□□ -0.61
SF3B3-204ENST00000563739 TMEM9BQ9NQ34 198 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 TMEM74BQ9NUR3 256 aa11.25□□□□□ -0.61
SF3B3-204ENST00000563739 UBQLN1Q9UMX0 589 aaKnown RBP11.25□□□□□ -0.61
SF3B3-204ENST00000563739 MYO18AQ92614 2054 aaKnown RBP11.24□□□□□ -0.61
SF3B3-204ENST00000563739 SPAARA0A1B0GVQ0 90 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 FAM221BA6H8Z2 402 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 K7EQS6 105 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 PIRO00625 290 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 DRD1P21728 446 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 GUCY2CP25092 1073 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 CDC25CP30307 473 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 TOB1P50616 345 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-204ENST00000563739 WNT7BP56706 349 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 DMP1Q13316 513 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-204ENST00000563739 KARSQ15046 597 aaKnown RBP11.24□□□□□ -0.61
SF3B3-204ENST00000563739 EML3Q32P44 896 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 ZC2HC1CQ53FD0 456 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-204ENST00000563739 ARHGAP15Q53QZ3 475 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 SDHAF4Q5VUM1 108 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 PEAR1Q5VY43 1037 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-204ENST00000563739 TMEM92Q6UXU6 159 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 ZPBP2Q6X784 338 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 APBB1IPQ7Z5R6 666 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-204ENST00000563739 MAB21L3Q8N8X9 362 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 USP33Q8TEY7 942 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 WASF1Q92558 559 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 FNBP1Q96RU3 617 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 FIZ1Q96SL8 496 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 PKMYT1Q99640 499 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 P2RY13Q9BPV8 354 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 OXCT2Q9BYC2 517 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-204ENST00000563739 ECT2Q9H8V3 914 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 PLEKHA5Q9HAU0 1116 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 BRMS1Q9HCU9 246 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 FSCN3Q9NQT6 498 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 EVLQ9UI08 416 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-204ENST00000563739 MBD1Q9UIS9 605 aaPredicted RBP11.24□□□□□ -0.61
SF3B3-204ENST00000563739 MSRB2Q9Y3D2 182 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 WNT6Q9Y6F9 365 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 CFAP46Q8IYW2 2715 aa11.24□□□□□ -0.61
SF3B3-204ENST00000563739 KALRNO60229 2985 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 ATG13O75143 517 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 FGF19O95750 216 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 PIGRP01833 764 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 CLTAP09496 248 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 MARCKSP29966 332 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-204ENST00000563739 PTGER3P43115 390 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 NCKAP1LP55160 1127 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 RAD51AP2Q09MP3 1159 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 SEMA3BQ13214 749 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 ORC2Q13416 577 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-204ENST00000563739 ZNF268Q14587 947 aaPredicted RBP11.23□□□□□ -0.61
SF3B3-204ENST00000563739 MTF1Q14872 753 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 ELF2Q15723 593 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 TTC38Q5R3I4 469 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 DAB2IPQ5VWQ8 1189 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 C9orf57Q5W0N0 161 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 HAUS3Q68CZ6 603 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 JADE1Q6IE81 842 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 DSTYKQ6XUX3 929 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 ITIH5Q86UX2 942 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 ERMNQ8TAM6 284 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 SNX29Q8TEQ0 813 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 FAM84AQ96KN4 292 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 CNOT6LQ96LI5 555 aaKnown RBP11.23□□□□□ -0.61
SF3B3-204ENST00000563739 IKZF4Q9H2S9 585 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 TDP1Q9NUW8 608 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 GCNT4Q9P109 453 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 GPSM3Q9Y4H4 160 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 ATXN2Q99700 1313 aaKnown RBP11.23□□□□□ -0.61
SF3B3-204ENST00000563739 ACACAQ13085 2346 aa11.23□□□□□ -0.61
SF3B3-204ENST00000563739 NPHP3-ACAD11A0A0J9YXS1 232 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 TISP43B9A030 160 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 HCRTO43612 131 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 RHOBTB1O94844 696 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 ODC1P11926 461 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 P2RY2P41231 377 aa11.22□□□□□ -0.61
SF3B3-204ENST00000563739 DGKEP52429 567 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms