RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 UNGP13051 313 aaPredicted RBP10.31□□□□□ -0.76
UBFD1-202ENST00000563366 CD58P19256 250 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 AKAP5P24588 427 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 TAF6P49848 677 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 AMPD2Q01433 879 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 TRIM71Q2Q1W2 868 aaKnown RBP10.31□□□□□ -0.76
UBFD1-202ENST00000563366 C9orf57Q5W0N0 161 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 C11orf63Q6NUN7 778 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 SCARA5Q6ZMJ2 495 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 DPH6Q7L8W6 267 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 MRPL10Q7Z7H8 261 aaKnown RBP10.31□□□□□ -0.76
UBFD1-202ENST00000563366 UNC93AQ86WB7 457 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 TMEM35BQ8NCS4 154 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 TPCN2Q8NHX9 752 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 SLC35G2Q8TBE7 412 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 SH3TC2Q8TF17 1288 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 RSPH1Q8WYR4 309 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 WNT8BQ93098 351 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 ZNF653Q96CK0 615 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 MMS19Q96T76 1030 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 MIS12Q9H081 205 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 THAP2Q9H0W7 228 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 MRPL47Q9HD33 250 aaKnown RBP10.31□□□□□ -0.76
UBFD1-202ENST00000563366 TRMT13Q9NUP7 481 aaKnown RBP10.31□□□□□ -0.76
UBFD1-202ENST00000563366 CTTNBP2NLQ9P2B4 639 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 PUF60Q9UHX1 559 aaKnown RBP10.31□□□□□ -0.76
UBFD1-202ENST00000563366 STRIP2Q9ULQ0 834 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 BARX2Q9UMQ3 279 aaPredicted RBP10.31□□□□□ -0.76
UBFD1-202ENST00000563366 SNX12Q9UMY4 172 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 HES2Q9Y543 173 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 WASF2Q9Y6W5 498 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 SCN1AP35498 2009 aa10.31□□□□□ -0.76
UBFD1-202ENST00000563366 A0A0U1RQF3 1178 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 ARHGEF37A1IGU5 675 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 GRID2IPA4D2P6 1211 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 MIF4GDA9UHW6 222 aaKnown RBP10.3□□□□□ -0.76
UBFD1-202ENST00000563366 CILPO75339 1184 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 ATP1A1P05023 1023 aaKnown RBP10.3□□□□□ -0.76
UBFD1-202ENST00000563366 CYP1A2P05177 515 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 CALB1P05937 261 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 THP07101 528 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 WEE2P0C1S8 567 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 VDRP11473 427 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 LRPAP1P30533 357 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 CD52P31358 61 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 SCTRP47872 440 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 NOMO3P69849 1222 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 TAP1Q03518 808 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 LPIN1Q14693 890 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 ZNF618Q5T7W0 954 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 PPP1R26Q5T8A7 1209 aaPredicted RBP10.3□□□□□ -0.76
UBFD1-202ENST00000563366 MEI1Q5TIA1 1274 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 PEX26Q7Z412 305 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 DAAM2Q86T65 1068 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 PALB2Q86YC2 1186 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 PHF13Q86YI8 300 aaPredicted RBP10.3□□□□□ -0.76
UBFD1-202ENST00000563366 SIX5Q8N196 739 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 ZNF606Q8WXB4 792 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 TMEM176AQ96HP8 235 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 ZMAT2Q96NC0 199 aaKnown RBP10.3□□□□□ -0.76
UBFD1-202ENST00000563366 NT5C1AQ9BXI3 368 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 LHX5Q9H2C1 402 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 CYLDQ9NQC7 956 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 GDAP2Q9NXN4 497 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 TUBGCP4Q9UGJ1 667 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 SALL4Q9UJQ4 1053 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 OGDHLQ9ULD0 1010 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 PCDHGA11Q9Y5H2 935 aa10.3□□□□□ -0.76
UBFD1-202ENST00000563366 CTAGE15A4D2H0 777 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 KPNA7A9QM74 516 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 PIRO00625 290 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 ENC1O14682 589 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 KIF4AO95239 1232 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 EOMESO95936 686 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 CTAGE8P0CG41 777 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 COL6A1P12109 1028 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 CCL5P13501 91 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 CD19P15391 556 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 SELPP16109 830 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 RPL9P32969 192 aaKnown RBP10.29□□□□□ -0.76
UBFD1-202ENST00000563366 CDH5P33151 784 aaPredicted RBP10.29□□□□□ -0.76
UBFD1-202ENST00000563366 PAFAH1B1P43034 410 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 CDK7P50613 346 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 SNX16P57768 344 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 ITIH3Q06033 890 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 GRIK3Q13003 919 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 DSC3Q14574 896 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 RPS6KA1Q15418 735 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 PKN2Q16513 984 aaKnown RBP10.29□□□□□ -0.76
UBFD1-202ENST00000563366 SGO2Q562F6 1265 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 GLRA4Q5JXX5 417 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 CCDC181Q5TID7 509 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 LRRC8DQ7L1W4 858 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 SLFN11Q7Z7L1 901 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 CTAGE6Q86UF2 777 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 CTAGE4Q8IX94 777 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 FAM126BQ8IXS8 530 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 MCOLN2Q8IZK6 566 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 LRRC57Q8N9N7 239 aa10.29□□□□□ -0.76
UBFD1-202ENST00000563366 APPL2Q8NEU8 664 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms