RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 ECHS1P30084 290 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 GPD2P43304 727 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 SOWAHAQ2M3V2 549 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 DCUN1D2Q6PH85 259 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 MAATS1Q7Z4T9 603 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 RSPH3Q86UC2 560 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 CD99L2Q8TCZ2 262 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 HERPUD2Q9BSE4 406 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 TRIM51Q9BSJ1 452 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 PIRO00625 290 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 HCRTO43612 131 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 PHF2O75151 1096 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 RPS6KA5O75582 802 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 MAN1A1P33908 653 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 SSR1P43307 286 aaKnown RBP9.95□□□□□ -0.82
LINC00838-201ENST00000562956 DR1Q01658 176 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 NFX1Q12986 1120 aaKnown RBP9.95□□□□□ -0.82
LINC00838-201ENST00000562956 PAK2Q13177 524 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 GPS2Q13227 327 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 TTC27Q6P3X3 843 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 EMBQ6PCB8 327 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 FOXR1Q6PIV2 292 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 RHOT1Q8IXI2 618 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 CAVIN3Q969G5 261 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 ZFP42Q96MM3 310 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 SRRDQ9UH36 339 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 STRIP2Q9ULQ0 834 aa9.95□□□□□ -0.82
LINC00838-201ENST00000562956 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.95□□□□□ -0.82
LINC00838-201ENST00000562956 PTGESO14684 152 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 PSTPIP1O43586 416 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 CD4P01730 458 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 HSPA6P17066 643 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 RFC1P35251 1148 aaPredicted RBP9.94□□□□□ -0.82
LINC00838-201ENST00000562956 GJC1P36383 396 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 PSMC1P62191 440 aaKnown RBP9.94□□□□□ -0.82
LINC00838-201ENST00000562956 MGAT3Q09327 533 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 PDCLQ13371 301 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 PTGISQ16647 500 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 FBXO47Q5MNV8 452 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 ANKS1BQ7Z6G8 1248 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 ACOT1Q86TX2 421 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 XYLT1Q86Y38 959 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 TTC39CQ8N584 583 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 MAGOHBQ96A72 148 aaKnown RBP9.94□□□□□ -0.82
LINC00838-201ENST00000562956 LPIN3Q9BQK8 851 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 FAM124BQ9H5Z6 455 aaPredicted RBP9.94□□□□□ -0.82
LINC00838-201ENST00000562956 SYNCQ9H7C4 482 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 VIPAS39Q9H9C1 493 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 TSPAN16Q9UKR8 245 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 RRP15Q9Y3B9 282 aaKnown RBP9.94□□□□□ -0.82
LINC00838-201ENST00000562956 SCN10AQ9Y5Y9 1956 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 FSCN2O14926 492 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 DAPK3O43293 454 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 PFKMP08237 780 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 KRT3P12035 628 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 THPOP40225 353 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 ATP13A4Q4VNC1 1196 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 ZNF618Q5T7W0 954 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 PPP1R26Q5T8A7 1209 aaPredicted RBP9.94□□□□□ -0.82
LINC00838-201ENST00000562956 LCLAT1Q6UWP7 414 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 TSEN2Q8NCE0 465 aaKnown RBP9.94□□□□□ -0.82
LINC00838-201ENST00000562956 JOSD2Q8TAC2 188 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 KBTBD7Q8WVZ9 684 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 PLVAPQ9BX97 442 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 NEUROG2Q9H2A3 272 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 DPEP3Q9H4B8 488 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 AGO3Q9H9G7 860 aaKnown RBP9.94□□□□□ -0.82
LINC00838-201ENST00000562956 FAM49BQ9NUQ9 324 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 KIAA1257Q9ULG3 409 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 CITO14578 2027 aa9.94□□□□□ -0.82
LINC00838-201ENST00000562956 SIGLEC16A6NMB1 481 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 KPNA7A9QM74 516 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 PIK3R2O00459 728 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 ATF7P17544 494 aaPredicted RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 CST5P28325 142 aaPredicted RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 CHRNA3P32297 505 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 PTGIRP43119 386 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 GABRB2P47870 512 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 AFF1P51825 1210 aaKnown RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 TAP1Q03518 808 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 PPP2R5EQ16537 467 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 CYP1B1Q16678 543 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 MAP3K21Q5TCX8 1036 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 RPAINQ86UA6 219 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 KATNAL2Q8IYT4 538 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 OR6B3Q8NGW1 331 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 SEC14L1Q92503 715 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 TRIM31Q9BZY9 425 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 DPH5Q9H2P9 285 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 FAM105AQ9NUU6 356 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 KLHL11Q9NVR0 708 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 MTUS1Q9ULD2 1270 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 UTP11Q9Y3A2 253 aaKnown RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 RALAP11233 206 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 FGFR1P11362 822 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 IGFBP6P24592 240 aaPredicted RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 GSCP56915 257 aaPredicted RBP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 CUL1Q13616 776 aa9.93□□□□□ -0.82
LINC00838-201ENST00000562956 HLTFQ14527 1009 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC00838-201ENST00000562956 RALGAPA2Q2PPJ7 1873 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms