RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 RBM12Q9NTZ6 932 aaKnown RBP11.88□□□□□ -0.51
KLHDC4-209ENST00000562872 C2orf42Q9NWW7 574 aa11.88□□□□□ -0.51
KLHDC4-209ENST00000562872 GDAP2Q9NXN4 497 aa11.88□□□□□ -0.51
KLHDC4-209ENST00000562872 GTSE1Q9NYZ3 720 aa11.88□□□□□ -0.51
KLHDC4-209ENST00000562872 GTF3C4Q9UKN8 822 aa11.88□□□□□ -0.51
KLHDC4-209ENST00000562872 ITGA11Q9UKX5 1188 aa11.88□□□□□ -0.51
KLHDC4-209ENST00000562872 CCL26Q9Y258 94 aa11.88□□□□□ -0.51
KLHDC4-209ENST00000562872 PCDHB5Q9Y5E4 795 aa11.88□□□□□ -0.51
KLHDC4-209ENST00000562872 ZNF292O60281 2723 aa11.88□□□□□ -0.51
KLHDC4-209ENST00000562872 NUP210Q8TEM1 1887 aaPredicted RBP11.88□□□□□ -0.51
KLHDC4-209ENST00000562872 EP300Q09472 2414 aaPredicted RBP11.88□□□□□ -0.51
KLHDC4-209ENST00000562872 FANCMQ8IYD8 2048 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 DMXL1Q9Y485 3027 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 MYBPHLA2RUH7 354 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 GABRDO14764 452 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 CHADO15335 359 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 EIF3DO15371 548 aaKnown RBP eCLIP11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 HUS1O60921 280 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 PRPF40AO75400 957 aaKnown RBP11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 LMNAP02545 664 aaKnown RBP11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 F11P03951 625 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 TMEM191BP0C7N4 346 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 TDGF1P13385 188 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 LMO2P25791 158 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 AFMP43652 599 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 RPS9P46781 194 aaKnown RBP11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 NLRP12P59046 1061 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 PSMC1P62191 440 aaKnown RBP11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 RBP5P82980 135 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 TSPY1Q01534 308 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 VEPH1Q14D04 833 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 Q6ZS52 159 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 UNC13DQ70J99 1090 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 LIMS2Q7Z4I7 341 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 ITIH5Q86UX2 942 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 DCP1BQ8IZD4 617 aaKnown RBP11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 ADGRF2Q8IZF7 708 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 PLEKHO2Q8TD55 490 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 KCNG4Q8TDN1 519 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 C2orf15Q8WU43 125 aaKnown RBP11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 CACTINQ8WUQ7 758 aaKnown RBP11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 ELMO3Q96BJ8 720 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 CHFRQ96EP1 664 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 GPR88Q9GZN0 384 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 CHRDQ9H2X0 955 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 CUEDC2Q9H467 287 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 SLC39A2Q9NP94 309 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 MAGED2Q9UNF1 606 aaPredicted RBP11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 SPTBN4Q9H254 2564 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 OTOGLQ3ZCN5 2332 aa11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 KIF26AQ9ULI4 1882 aaPredicted RBP11.87□□□□□ -0.51
KLHDC4-209ENST00000562872 OTOL1A6NHN0 477 aaPredicted RBP11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 ZNF233A6NK53 670 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 ACTN4O43707 911 aaKnown RBP11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 KLRC4O43908 158 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 DLATP10515 647 aaKnown RBP11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 CHRNB1P11230 501 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 ME1P48163 572 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 CASP4P49662 377 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 SNRNP35Q16560 246 aaKnown RBP11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 NAIF1Q69YI7 327 aaPredicted RBP11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 TXNDC8Q6A555 127 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 YAF2Q8IY57 180 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 TOP6BLQ8N6T0 577 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 MAB21L3Q8N8X9 362 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 ZNF516Q92618 1163 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 NELL1Q92832 810 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 HPDLQ96IR7 371 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 ANKRD36BP1Q96IX9 119 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 SLC22A12Q96S37 553 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 NELL2Q99435 816 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 ACBD6Q9BR61 282 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 LMAN1LQ9HAT1 526 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 CRTAC1Q9NQ79 661 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 SERTAD1Q9UHV2 236 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 FBXO4Q9UKT5 387 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 MRPS17Q9Y2R5 130 aaKnown RBP11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 ZDHHC9Q9Y397 364 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 OBSL1O75147 1896 aa11.86□□□□□ -0.51
KLHDC4-209ENST00000562872 SPECC1L-ADORA2AF8WAN1 911 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 MAN2B1O00754 1011 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 CST3P01034 146 aaPredicted RBP11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 CDC25CP30307 473 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 CTHP32929 405 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 KPNA1P52294 538 aaPredicted RBP11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 MYL7Q01449 175 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 SATB1Q01826 763 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 CYP24A1Q07973 514 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 DMWDQ09019 674 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 SMARCB1Q12824 385 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 BMT2Q1RMZ1 405 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 ZNF528Q3MIS6 628 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 ARHGAP15Q53QZ3 475 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 TRIM68Q6AZZ1 485 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 FAM171BQ6P995 826 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 TRAPPC11Q7Z392 1133 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 WDR49Q8IV35 697 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 CMTM8Q8IZV2 173 aa11.85□□□□□ -0.51
KLHDC4-209ENST00000562872 TMEM86AQ8N2M4 240 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms