RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PCDHB13Q9Y5F0 798 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 AKAP3O75969 853 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 YY1P25490 414 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 AP2B1P63010 937 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 GSTM4Q03013 218 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 ZBTB16Q05516 673 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 SEL1L2Q5TEA6 688 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 C4orf33Q8N1A6 199 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 OR6Y1Q8NGX8 325 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 PHF12Q96QT6 1004 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 CCDC77Q9BR77 488 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 VPS33BQ9H267 617 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 EPB41L1Q9H4G0 881 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 RPAP3Q9H6T3 665 aaPredicted RBP14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 FBXO6Q9NRD1 293 aaPredicted RBP14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 PPM1HQ9ULR3 514 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 RIPK3Q9Y572 518 aa14.74□□□□□ -0.05
GTF3C1-203ENST00000562609 TMEM247A6NEH6 219 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 FAM13AO94988 1023 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 TROVE2P10155 538 aaKnown RBP eCLIP14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 CA4P22748 312 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 CPA2P48052 419 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 RPS6P62753 249 aaKnown RBP14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 KRT17Q04695 432 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 TNFAIP1Q13829 316 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 GRM2Q14416 872 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 SLC1A5Q15758 541 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 ANGEL2Q5VTE6 544 aaKnown RBP14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 GRAMD4Q6IC98 578 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 KLHL35Q6PF15 583 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 KLHDC10Q6PID8 442 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 C1orf228Q6PIY5 440 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 RHBDF2Q6PJF5 856 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 RIPOR1Q6ZS17 1223 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 PALB2Q86YC2 1186 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 ARHGAP24Q8N264 748 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 SLC30A5Q8TAD4 765 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 RSPH1Q8WYR4 309 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 MAML1Q92585 1016 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 C9orf72Q96LT7 481 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 SEPT11Q9NVA2 429 aaKnown RBP14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 WHRNQ9P202 907 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 TRAF3IP3Q9Y228 551 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 R3HDM2Q9Y2K5 976 aaKnown RBP14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 TMEM98Q9Y2Y6 226 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 ZNF541Q9H0D2 1346 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 BCRP11274 1271 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 IDO1P14902 403 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 MTTPP55157 894 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 JAM2P57087 298 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 ZNF280AP59817 542 aaPredicted RBP14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 MRPS9P82933 396 aaKnown RBP14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 TRIP13Q15645 432 aaPredicted RBP14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 CCDC62Q6P9F0 684 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 C1orf186Q6ZWK4 172 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 TRABD2AQ86V40 505 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 ZNF75CPQ92670 426 aaPredicted RBP14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 MXRA8Q9BRK3 442 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 TRABDQ9H4I3 376 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 TIMMDC1Q9NPL8 285 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 FER1L6Q2WGJ9 1857 aa14.73□□□□□ -0.05
GTF3C1-203ENST00000562609 ZMYM2Q9UBW7 1377 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 F8W8V4 182 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 SORBS3O60504 671 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 SERPINB8P50452 374 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 ITGA8P53708 1063 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 HNRNPDQ14103 355 aaKnown RBP14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 EAPPQ56P03 285 aaPredicted RBP14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 LRRC6Q86X45 466 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 PRPF31Q8WWY3 499 aaKnown RBP14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 ATG4CQ96DT6 458 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 MAML3Q96JK9 1138 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 WRNIP1Q96S55 665 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 TSPAN18Q96SJ8 248 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 ZSWIM1Q9BR11 485 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 TAS2R14Q9NYV8 317 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 ANKFY1Q9P2R3 1169 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 KIF13BQ9NQT8 1826 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 ATAD5Q96QE3 1844 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 ASTN1O14525 1302 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 WDR46O15213 610 aaKnown RBP14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 RARBP10826 455 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 LMNB1P20700 586 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 STAT1P42224 750 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 ASPHQ12797 758 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 CYP1B1Q16678 543 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 PDSS2Q86YH6 399 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 TREML1Q86YW5 311 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 FAM81BQ96LP2 452 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 PRICKLE1Q96MT3 831 aaPredicted RBP14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 TEKT3Q9BXF9 490 aa14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 CTDP1Q9Y5B0 961 aaPredicted RBP14.72□□□□□ -0.05
GTF3C1-203ENST00000562609 WDR91A4D1P6 747 aa14.71□□□□□ -0.05
GTF3C1-203ENST00000562609 MIF4GDA9UHW6 222 aaKnown RBP14.71□□□□□ -0.05
GTF3C1-203ENST00000562609 BUD23O43709 281 aaKnown RBP14.71□□□□□ -0.05
GTF3C1-203ENST00000562609 PEX10O60683 326 aa14.71□□□□□ -0.05
GTF3C1-203ENST00000562609 ZBED4O75132 1171 aa14.71□□□□□ -0.05
GTF3C1-203ENST00000562609 PDE5AO76074 875 aa14.71□□□□□ -0.05
GTF3C1-203ENST00000562609 STK10O94804 968 aaKnown RBP14.71□□□□□ -0.05
GTF3C1-203ENST00000562609 GGPS1O95749 300 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms