RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 C2orf27AQ580R0 203 aa19.92■□□□□ 0.78
KATNB1-202ENST00000562542 ZPBP2Q6X784 338 aa19.92■□□□□ 0.78
KATNB1-202ENST00000562542 LPCAT2Q7L5N7 544 aa19.92■□□□□ 0.78
KATNB1-202ENST00000562542 TMEM150AQ86TG1 271 aa19.92■□□□□ 0.78
KATNB1-202ENST00000562542 METTL23Q86XA0 190 aa19.92■□□□□ 0.78
KATNB1-202ENST00000562542 ABCA7Q8IZY2 2146 aa19.92■□□□□ 0.78
KATNB1-202ENST00000562542 ATP2A3Q93084 1043 aa19.92■□□□□ 0.78
KATNB1-202ENST00000562542 FAM212AQ96EL1 285 aa19.92■□□□□ 0.78
KATNB1-202ENST00000562542 CNOT6LQ96LI5 555 aaKnown RBP19.92■□□□□ 0.78
KATNB1-202ENST00000562542 TNFSF9P41273 254 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 SMTNP53814 917 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 ATXN3P54252 364 aaPredicted RBP19.91■□□□□ 0.78
KATNB1-202ENST00000562542 GUCY1B3Q02153 619 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 MAPK7Q13164 816 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 THEM5Q8N1Q8 247 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 HDDC3Q8N4P3 179 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 MDGA1Q8NFP4 955 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 SPPL2BQ8TCT7 592 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 C2orf15Q8WU43 125 aaKnown RBP19.91■□□□□ 0.78
KATNB1-202ENST00000562542 OSCP1Q8WVF1 389 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 SPACA7Q96KW9 195 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 TRPC7Q9HCX4 862 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 DSEQ9UL01 958 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 WNT6Q9Y6F9 365 aa19.91■□□□□ 0.78
KATNB1-202ENST00000562542 H0Y626 953 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 JAK2O60674 1132 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 ALDH1A2O94788 518 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 TRIM16O95361 564 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 F11P03951 625 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 HAPLN1P10915 354 aaPredicted RBP19.9■□□□□ 0.78
KATNB1-202ENST00000562542 FXR2P51116 673 aaKnown RBP eCLIP19.9■□□□□ 0.78
KATNB1-202ENST00000562542 RAD51AP2Q09MP3 1159 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 NR1H3Q13133 447 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 ORC2Q13416 577 aaPredicted RBP19.9■□□□□ 0.78
KATNB1-202ENST00000562542 ZNF268Q14587 947 aaPredicted RBP19.9■□□□□ 0.78
KATNB1-202ENST00000562542 ANKRD1Q15327 319 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 RINT1Q6NUQ1 792 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 MON1AQ86VX9 555 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 RASSF3Q86WH2 238 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 PROSER1Q86XN7 944 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 CHCHD4Q8N4Q1 142 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 CCDC33Q8N5R6 958 aa19.9■□□□□ 0.78
KATNB1-202ENST00000562542 NSUN7Q8NE18 718 aaKnown RBP19.9■□□□□ 0.78
KATNB1-202ENST00000562542 RPF1Q9H9Y2 349 aaKnown RBP19.9■□□□□ 0.78
KATNB1-202ENST00000562542 GCN1Q92616 2671 aaKnown RBP19.9■□□□□ 0.78
KATNB1-202ENST00000562542 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 CFIP05156 583 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 MAPTP10636 758 aaKnown RBP19.89■□□□□ 0.77
KATNB1-202ENST00000562542 PAX3P23760 479 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 FAM160A1Q05DH4 1040 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 SMARCB1Q12824 385 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 SOWAHCQ53LP3 525 aaPredicted RBP19.89■□□□□ 0.77
KATNB1-202ENST00000562542 TTC38Q5R3I4 469 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 SPATA1Q5VX52 437 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 LMBRD2Q68DH5 695 aaPredicted RBP19.89■□□□□ 0.77
KATNB1-202ENST00000562542 PDZD3Q86UT5 571 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 SYT12Q8IV01 421 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 TMEFF1Q8IYR6 380 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 TMEM161BQ8NDZ6 487 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 STKLD1Q8NE28 680 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 USP33Q8TEY7 942 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 SPIRE2Q8WWL2 714 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 RLN3Q8WXF3 142 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 GTF3C6Q969F1 213 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 ATXN2Q99700 1313 aaKnown RBP19.89■□□□□ 0.77
KATNB1-202ENST00000562542 NTPCRQ9BSD7 190 aaKnown RBP19.89■□□□□ 0.77
KATNB1-202ENST00000562542 GTPBP2Q9BX10 602 aaKnown RBP19.89■□□□□ 0.77
KATNB1-202ENST00000562542 HAPLN2Q9GZV7 340 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 KCNG1Q9UIX4 513 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 STK24Q9Y6E0 443 aa19.89■□□□□ 0.77
KATNB1-202ENST00000562542 ASCC3Q8N3C0 2202 aaKnown RBP19.88■□□□□ 0.77
KATNB1-202ENST00000562542 ZNF638Q14966 1978 aaKnown RBP19.88■□□□□ 0.77
KATNB1-202ENST00000562542 TNFRSF10BO14763 440 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 CYP11A1P05108 521 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 CKMP06732 381 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 PLS3P13797 630 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 HMGA1P17096 107 aaKnown RBP19.88■□□□□ 0.77
KATNB1-202ENST00000562542 ENOX2Q16206 610 aaKnown RBP19.88■□□□□ 0.77
KATNB1-202ENST00000562542 KYAT1Q16773 422 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 C9orf57Q5W0N0 161 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 C1orf186Q6ZWK4 172 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 PIP4P1Q86T03 277 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 TSPAN18Q96SJ8 248 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 TIPINQ9BVW5 301 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 RAB34Q9BZG1 259 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 BCCIPQ9P287 314 aaKnown RBP eCLIP19.88■□□□□ 0.77
KATNB1-202ENST00000562542 MMP17Q9ULZ9 603 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 GPSM3Q9Y4H4 160 aa19.88■□□□□ 0.77
KATNB1-202ENST00000562542 SETXQ7Z333 2677 aaKnown RBP19.87■□□□□ 0.77
KATNB1-202ENST00000562542 TRAV19A0A0A6YYK7 116 aa19.87■□□□□ 0.77
KATNB1-202ENST00000562542 CYB561D2O14569 222 aa19.87■□□□□ 0.77
KATNB1-202ENST00000562542 USP17L7P0C7H9 530 aa19.87■□□□□ 0.77
KATNB1-202ENST00000562542 CSH1P0DML2 217 aa19.87■□□□□ 0.77
KATNB1-202ENST00000562542 CSH2P0DML3 217 aa19.87■□□□□ 0.77
KATNB1-202ENST00000562542 PTGER3P43115 390 aa19.87■□□□□ 0.77
KATNB1-202ENST00000562542 LIG4P49917 911 aa19.87■□□□□ 0.77
KATNB1-202ENST00000562542 SEMA3BQ13214 749 aa19.87■□□□□ 0.77
KATNB1-202ENST00000562542 ZNF77Q15935 545 aa19.87■□□□□ 0.77
KATNB1-202ENST00000562542 EML3Q32P44 896 aa19.87■□□□□ 0.77
KATNB1-202ENST00000562542 LYSMD4Q5XG99 296 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms