RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 RMND1Q9NWS8 449 aa12.34□□□□□ -0.43
FANCA-209ENST00000562424 DDX43Q9NXZ2 648 aaKnown RBP12.34□□□□□ -0.43
FANCA-209ENST00000562424 GDE1Q9NZC3 331 aa12.34□□□□□ -0.43
FANCA-209ENST00000562424 MAPK8IP1Q9UQF2 711 aa12.34□□□□□ -0.43
FANCA-209ENST00000562424 SLC27A5Q9Y2P5 690 aa12.34□□□□□ -0.43
FANCA-209ENST00000562424 ASB3Q9Y575 518 aa12.34□□□□□ -0.43
FANCA-209ENST00000562424 GREB1Q4ZG55 1949 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 LRRIQ3A6PVS8 624 aaPredicted RBP12.33□□□□□ -0.44
FANCA-209ENST00000562424 MAPK13O15264 365 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 SOAT2O75908 522 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 STAU1O95793 577 aaKnown RBP12.33□□□□□ -0.44
FANCA-209ENST00000562424 CEBPBP17676 345 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 CCR2P41597 374 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 LHX1P48742 406 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 AP3M2P53677 418 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 TSPY1Q01534 308 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 ZCWPW2Q504Y3 356 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 CYP4A22Q5TCH4 519 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 PARM1Q6UWI2 310 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 MTSS1LQ765P7 747 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 PDZD4Q76G19 769 aaPredicted RBP12.33□□□□□ -0.44
FANCA-209ENST00000562424 OSTM1Q86WC4 334 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 ELOA2Q8IYF1 753 aaPredicted RBP12.33□□□□□ -0.44
FANCA-209ENST00000562424 FGF14Q92915 247 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 TCEAL4Q96EI5 215 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 LRRC3Q9BY71 257 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 HOOK1Q9UJC3 728 aaKnown RBP12.33□□□□□ -0.44
FANCA-209ENST00000562424 FRMD4BQ9Y2L6 1034 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 NUMBLQ9Y6R0 609 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 OBSL1O75147 1896 aa12.33□□□□□ -0.44
FANCA-209ENST00000562424 ZNF638Q14966 1978 aaKnown RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 NUP210Q8TEM1 1887 aaPredicted RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 NRG2O14511 850 aaPredicted RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 NARSO43776 548 aaKnown RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 MOSPD3O75425 235 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 SMC2O95347 1197 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 C4BPAP04003 597 aaKnown RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 HAPLN1P10915 354 aaPredicted RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 SRFP11831 508 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 NR2F2P24468 414 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 ACAT1P24752 427 aaKnown RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 PCSK1P29120 753 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 AVPR2P30518 371 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 ATICP31939 592 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 TRPC3Q13507 836 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 NFE2Q16621 373 aaPredicted RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 MGAT5BQ3V5L5 792 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 COBLL1Q53SF7 1204 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 INTS6LQ5JSJ4 861 aaKnown RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 ZNF658Q5TYW1 1059 aaPredicted RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 CEP135Q66GS9 1140 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 TMC8Q8IU68 726 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 SMYD4Q8IYR2 804 aaPredicted RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 TTC13Q8NBP0 860 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 KBTBD7Q8WVZ9 684 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 PSMG2Q969U7 264 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 SYAP1Q96A49 352 aaPredicted RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 MCRS1Q96EZ8 462 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 PKMYT1Q99640 499 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 SEPT5Q99719 369 aaPredicted RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 XYLT2Q9H1B5 865 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 IRF2BPLQ9H1B7 796 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 TMLHEQ9NVH6 421 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 ABI2Q9NYB9 513 aaPredicted RBP12.32□□□□□ -0.44
FANCA-209ENST00000562424 PCDHB5Q9Y5E4 795 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 PCDHA5Q9Y5H7 936 aa12.32□□□□□ -0.44
FANCA-209ENST00000562424 IKBKBO14920 756 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 HCRTO43612 131 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 KINO60870 393 aaKnown RBP12.31□□□□□ -0.44
FANCA-209ENST00000562424 PHACTR2O75167 634 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 GADD45BO75293 160 aaPredicted RBP12.31□□□□□ -0.44
FANCA-209ENST00000562424 TACC1O75410 805 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 AKAP3O75969 853 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 PDGFBP01127 241 aaPredicted RBP12.31□□□□□ -0.44
FANCA-209ENST00000562424 FAM163BP0C2L3 166 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 MYL4P12829 197 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 ATF6P18850 670 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 WARSP23381 471 aaKnown RBP12.31□□□□□ -0.44
FANCA-209ENST00000562424 RPL13P26373 211 aaKnown RBP12.31□□□□□ -0.44
FANCA-209ENST00000562424 ANP32AP39687 249 aaKnown RBP12.31□□□□□ -0.44
FANCA-209ENST00000562424 PRCPP42785 496 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 CDR1P51861 262 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 MYL6P60660 151 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 TNNC1P63316 161 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 DLG4P78352 724 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 BIRC3Q13489 604 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 EDRF1Q3B7T1 1238 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 WDR72Q3MJ13 1102 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 DNAJB7Q7Z6W7 309 aaPredicted RBP12.31□□□□□ -0.44
FANCA-209ENST00000562424 ITIH5Q86UX2 942 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 ST13P5Q8NFI4 369 aaPredicted RBP12.31□□□□□ -0.44
FANCA-209ENST00000562424 SHKBP1Q8TBC3 707 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 ERCC4Q92889 916 aaPredicted RBP12.31□□□□□ -0.44
FANCA-209ENST00000562424 SMARCE1Q969G3 411 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 MMS19Q96T76 1030 aa12.31□□□□□ -0.44
FANCA-209ENST00000562424 RPP25Q9BUL9 199 aaKnown RBP12.31□□□□□ -0.44
FANCA-209ENST00000562424 GTPBP4Q9BZE4 634 aaKnown RBP12.31□□□□□ -0.44
FANCA-209ENST00000562424 VRTNQ9H8Y1 702 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms