RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 TMEM86AQ8N2M4 240 aa11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 ZSCAN18Q8TBC5 510 aaPredicted RBP11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 SPPL2BQ8TCT7 592 aa11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 TMEM174Q8WUU8 243 aa11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 ELSPBP1Q96BH3 223 aa11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 LRRC3BQ96PB8 259 aa11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 FNBP1Q96RU3 617 aa11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 MRPL45Q9BRJ2 306 aaKnown RBP11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 FOXQ1Q9C009 403 aa11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 TBC1D17Q9HA65 648 aa11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 CRTAC1Q9NQ79 661 aa11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 FAM86C1Q9NVL1 165 aa11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 CGNQ9P2M7 1197 aaKnown RBP11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 MYH10P35580 1976 aa11.9□□□□□ -0.5
LPCAT4-202ENST00000562404 H0Y858 1186 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 GALR2O43603 387 aaPredicted RBP11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 DCNP07585 359 aaKnown RBP11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 PDGFRBP09619 1106 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 CD72P21854 359 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 TUFMP49411 452 aaKnown RBP11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 STARD6P59095 220 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 CLDN10P78369 228 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 NUCB2P80303 420 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 TSPY1Q01534 308 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 MYO1EQ12965 1108 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 DDR2Q16832 855 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 SLC44A4Q53GD3 710 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 FAM171BQ6P995 826 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 DPH6Q7L8W6 267 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 DCP1BQ8IZD4 617 aaKnown RBP11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 C2orf15Q8WU43 125 aaKnown RBP11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 SMARCD2Q92925 531 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 TRPV4Q9HBA0 871 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 ZFP14Q9HCL3 533 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 DLGAP2Q9P1A6 1054 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 TRAF3IP3Q9Y228 551 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 MTF2Q9Y483 593 aaPredicted RBP11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 ASB3Q9Y575 518 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 PCDHB5Q9Y5E4 795 aa11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 HELZP42694 1942 aaKnown RBP11.89□□□□□ -0.51
LPCAT4-202ENST00000562404 FANCMQ8IYD8 2048 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 HEPACAM2A8MVW5 462 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 PRPF40AO75400 957 aaKnown RBP11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 TADA3O75528 432 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 PRAMEF12O95522 483 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 F11P03951 625 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 WARSP23381 471 aaKnown RBP11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 HOXD11P31277 338 aaPredicted RBP11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 LHX1P48742 406 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 MYL7Q01449 175 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 KCNB1Q14721 858 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 MLF2Q15773 248 aaPredicted RBP11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 WDR72Q3MJ13 1102 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 ZCWPW2Q504Y3 356 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 PHLDB3Q6NSJ2 640 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 ARID3BQ8IVW6 561 aaPredicted RBP11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 LEMD2Q8NC56 503 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 GOLGA5Q8TBA6 731 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 FAM200AQ8TCP9 573 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 EEF2KMTQ96G04 330 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 MMS19Q96T76 1030 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 SYT15Q9BQS2 421 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 DDX23Q9BUQ8 820 aaKnown RBP11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 SMG9Q9H0W8 520 aaKnown RBP11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 SDCBP2Q9H190 292 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 ATXN3LQ9H3M9 355 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 DPEP3Q9H4B8 488 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 HEBP1Q9NRV9 189 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 TMEM30AQ9NV96 361 aa11.88□□□□□ -0.51
LPCAT4-202ENST00000562404 ARNTLO00327 626 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 STK25O00506 426 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 GADD45BO75293 160 aaPredicted RBP11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 AKAP3O75969 853 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 STAU1O95793 577 aaKnown RBP11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 RAP1GAPP47736 663 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 CACNA2D1P54289 1103 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 PTPN5P54829 565 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 CDH8P55286 799 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 SMARCB1Q12824 385 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 NFE2Q16621 373 aaPredicted RBP11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 GPR158Q5T848 1215 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 CEP135Q66GS9 1140 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 ITIH5Q86UX2 942 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 ALYREFQ86V81 257 aaKnown RBP11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 CCDC105Q8IYK2 499 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 GUF1Q8N442 669 aaKnown RBP11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 RIN3Q8TB24 985 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 SPATA18Q8TC71 538 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 MYLPFQ96A32 169 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 SLC46A2Q9BY10 475 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 SLITRK6Q9H5Y7 841 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 SMYD3Q9H7B4 428 aa11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 NXF1Q9UBU9 619 aaKnown RBP11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 MAGED2Q9UNF1 606 aaPredicted RBP11.87□□□□□ -0.51
LPCAT4-202ENST00000562404 PIEZO1Q92508 2521 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 CALUO43852 315 aaPredicted RBP11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 TACC1O75410 805 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 TRIM49P0CI25 452 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 TRIM49CP0CI26 452 aa11.86□□□□□ -0.51
LPCAT4-202ENST00000562404 PSMC3P17980 439 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms