RNA–Protein interactions for RNA: ENST00000561911.5

SPG7-204, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 1,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-204ENST00000561911 FAM71AQ8IYT1 594 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 DEFB123Q8N688 67 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 MYCBPAPQ8TBZ2 947 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 TMEM176AQ96HP8 235 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 LPIN3Q9BQK8 851 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 TLE6Q9H808 572 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 TMLHEQ9NVH6 421 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 GTF3C4Q9UKN8 822 aa16.73■□□□□ 0.27
SPG7-204ENST00000561911 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.73■□□□□ 0.271e-6■■□□□ 12.6
SPG7-204ENST00000561911 A0A1W2PQJ5 194 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 RNF225M0QZC1 329 aaPredicted RBP16.72■□□□□ 0.27
SPG7-204ENST00000561911 PER2O15055 1255 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 ADCY5O95622 1261 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 PAEPP09466 180 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 IGFBP4P22692 258 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 STAT1P42224 750 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 NRIP1P48552 1158 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 MAPRE1Q15691 268 aaKnown RBP16.72■□□□□ 0.27
SPG7-204ENST00000561911 NFE2Q16621 373 aaPredicted RBP16.72■□□□□ 0.27
SPG7-204ENST00000561911 DUSP6Q16828 381 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 TPGS2Q68CL5 300 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 TMC6Q7Z403 805 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 RBM23Q86U06 439 aaKnown RBP16.72■□□□□ 0.27
SPG7-204ENST00000561911 PALB2Q86YC2 1186 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 BAP1Q92560 729 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 MYLPFQ96A32 169 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 HEXIM2Q96MH2 286 aaKnown RBP16.72■□□□□ 0.27
SPG7-204ENST00000561911 CDX2Q99626 313 aaPredicted RBP16.72■□□□□ 0.27
SPG7-204ENST00000561911 AFF4Q9UHB7 1163 aaKnown RBP16.72■□□□□ 0.27
SPG7-204ENST00000561911 MYO6Q9UM54 1294 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 MYO7AQ13402 2215 aa16.72■□□□□ 0.27
SPG7-204ENST00000561911 CYP26A1O43174 497 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 TGM5O43548 720 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 ABLIM3O94929 683 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 GLUD1P00367 558 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 C1RP00736 705 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 GYPCP04921 128 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 CD19P15391 556 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 SOX5P35711 763 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 SMARCB1Q12824 385 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 TRIM14Q14142 442 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 GSE1Q14687 1217 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 TCEAL5Q5H9L2 206 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 LILRA6Q6PI73 481 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 RNF19BQ6ZMZ0 732 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 C4orf50Q6ZRC1 276 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 PPFIBP1Q86W92 1011 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 C12orf29Q8N999 325 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 ZNF461Q8TAF7 563 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 MYLIPQ8WY64 445 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 GUCD1Q96NT3 240 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 PGLYRP2Q96PD5 576 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 CDCA3Q99618 268 aaPredicted RBP16.71■□□□□ 0.27
SPG7-204ENST00000561911 FAM49BQ9NUQ9 324 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 KIAA1257Q9ULG3 409 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 CAPN11Q9UMQ6 739 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 TRANK1O15050 2925 aa16.71■□□□□ 0.27
SPG7-204ENST00000561911 MTMR11A4FU01 709 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 GFPT2O94808 682 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 VNN2O95498 520 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 CCDC130P13994 396 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 CDC25BP30305 580 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 MRE11P49959 708 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 CLCN4P51793 760 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 CDR1P51861 262 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 SGO2Q562F6 1265 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 SPATA2LQ8IUW3 424 aaPredicted RBP16.7■□□□□ 0.26
SPG7-204ENST00000561911 ATAD1Q8NBU5 361 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 C2orf15Q8WU43 125 aaKnown RBP16.7■□□□□ 0.26
SPG7-204ENST00000561911 SLC22A17Q8WUG5 538 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 CPLX3Q8WVH0 158 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 PCED1BQ96HM7 432 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 B3GNT5Q9BYG0 378 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 MTMR10Q9NXD2 777 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 ABI2Q9NYB9 513 aaPredicted RBP16.7■□□□□ 0.26
SPG7-204ENST00000561911 FBXW11Q9UKB1 542 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 MAFFQ9ULX9 164 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 LUC7L2Q9Y383 392 aaKnown RBP16.7■□□□□ 0.26
SPG7-204ENST00000561911 PCDHB5Q9Y5E4 795 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 MYO9BQ13459 2157 aa16.7■□□□□ 0.26
SPG7-204ENST00000561911 LRRC53A6NM62 1247 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 CALCAP01258 141 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 VDRP11473 427 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 ATF2P15336 505 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 EPCAMP16422 314 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 BRD2P25440 801 aaKnown RBP16.69■□□□□ 0.26
SPG7-204ENST00000561911 GNA15P30679 374 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 CASP14P31944 242 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 CLCN1P35523 988 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 BPIFB4P59827 614 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 ZBED6P86452 979 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 CYP27A1Q02318 531 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 PTK2Q05397 1052 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 ADCY1Q08828 1119 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 HYAL1Q12794 435 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 CFAP221Q4G0U5 840 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 ARHGAP17Q68EM7 881 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 GPIHBP1Q8IV16 184 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 FUKQ8N0W3 1084 aa16.69■□□□□ 0.26
SPG7-204ENST00000561911 KREMEN2Q8NCW0 462 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms