RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 PDCLQ13371 301 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 PTK6Q13882 451 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 CCNG2Q16589 344 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 DEFB115Q30KQ5 88 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 XKR4Q5GH76 650 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 CYP4A22Q5TCH4 519 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 MFSD14CQ5VZR4 134 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 LCLAT1Q6UWP7 414 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 ALKAL1Q6UXT8 129 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 XYLT1Q86Y38 959 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 C7orf31Q8N865 590 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 FAM76AQ8TAV0 307 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 RIN2Q8WYP3 895 aaPredicted RBP13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 ZNF560Q96MR9 790 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 MTG1Q9BT17 334 aaPredicted RBP13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 TXLNGYQ9BZA5 131 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 OSBPL8Q9BZF1 889 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 TRIM31Q9BZY9 425 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 UPF3AQ9H1J1 476 aaKnown RBP13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 SYNCQ9H7C4 482 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 CDHR5Q9HBB8 845 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 WHRNQ9P202 907 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 HMGXB4Q9UGU5 601 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 PIN4Q9Y237 131 aaKnown RBP13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 GINS2Q9Y248 185 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 PLAAQ9Y263 795 aa13.36□□□□□ -0.27
AC055717.2-201ENST00000561864 GOLGA6L10A6NI86 522 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 KRT7P08729 469 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 KRT3P12035 628 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 CYBAP13498 195 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 KCNE1P15382 129 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 CYP3A5P20815 502 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 PSMA2P25787 234 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 PNPLA4P41247 253 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 RPL21P46778 160 aaKnown RBP13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 NKX3-2P78367 333 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 BEX3Q00994 111 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 OGDHQ02218 1023 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 CAV1Q03135 178 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 ACAP1Q15027 740 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 PPP1R7Q15435 360 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 UAP1Q16222 522 aaPredicted RBP13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 UBXN11Q5T124 520 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 UNC93AQ86WB7 457 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 MCRS1Q96EZ8 462 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 HHIPL1Q96JK4 782 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 HEXIM2Q96MH2 286 aaKnown RBP13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 ZMAT2Q96NC0 199 aaKnown RBP13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 SLITRK1Q96PX8 696 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 CPXM1Q96SM3 734 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 NXF3Q9H4D5 531 aaKnown RBP13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 TUBGCP4Q9UGJ1 667 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 CYTH4Q9UIA0 394 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 SNX24Q9Y343 169 aa13.35□□□□□ -0.27
AC055717.2-201ENST00000561864 HMGB1P1B2RPK0 211 aaPredicted RBP13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 GOLGA8SH3BPF8 625 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 ECM2O94769 699 aaPredicted RBP13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 TJP3O95049 919 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 ERBB2P04626 1255 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 GJC1P36383 396 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 GPD2P43304 727 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 GYS2P54840 703 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 EIF3BP55884 814 aaKnown RBP13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 SNX16P57768 344 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 LMNB2Q03252 620 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 KRT17Q04695 432 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 DHX9Q08211 1270 aaKnown RBP13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 NFX1Q12986 1120 aaKnown RBP13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 CALCOCO2Q13137 446 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 HADHQ16836 314 aaKnown RBP13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 GOLGA7BQ2TAP0 167 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 C9orf57Q5W0N0 161 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 SPOCD1Q6ZMY3 1216 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 PAXIP1Q6ZW49 1069 aaPredicted RBP13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 ATL2Q8NHH9 583 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 UBLCP1Q8WVY7 318 aaPredicted RBP13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 C1orf54Q8WWF1 131 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 ART4Q93070 314 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 HERPUD2Q9BSE4 406 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 FRMD8P1Q9BZ68 369 aaPredicted RBP13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 EFR3BQ9Y2G0 817 aa13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.34□□□□□ -0.27
AC055717.2-201ENST00000561864 F8VP50 259 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 H0YGN5 161 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 M0QZ92 97 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 PIRO00625 290 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 ALDH1A1P00352 501 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 RFC1P35251 1148 aaPredicted RBP13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 PLTPP55058 493 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 IRX5P78411 483 aaPredicted RBP13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 MRPS6P82932 125 aaKnown RBP13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 ORC1Q13415 861 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 SLMAPQ14BN4 828 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 SV2CQ496J9 727 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 ODF2Q5BJF6 829 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 TTMPQ5BVD1 217 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 DAB2IPQ5VWQ8 1189 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 ARHGAP17Q68EM7 881 aa13.33□□□□□ -0.28
AC055717.2-201ENST00000561864 CYP4F22Q6NT55 531 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms