RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 THAP12O43422 761 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 TBC1D4O60343 1298 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 CD19P15391 556 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 CHRNB2P17787 502 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 PTPN1P18031 435 aaKnown RBP13.46□□□□□ -0.25
CMTM4-203ENST00000561680 BRD2P25440 801 aaKnown RBP13.46□□□□□ -0.25
CMTM4-203ENST00000561680 ANXA13P27216 316 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 SMAD3P84022 425 aaKnown RBP13.46□□□□□ -0.25
CMTM4-203ENST00000561680 CCZ1BP86790 482 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 CCZ1P86791 482 aaPredicted RBP13.46□□□□□ -0.25
CMTM4-203ENST00000561680 TSPY1Q01534 308 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 FMO1Q01740 532 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 CDR2Q01850 454 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 UBE3AQ05086 875 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 PSMD5Q16401 504 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 CTXN3Q4LDR2 81 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 SGO2Q562F6 1265 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 ARHGAP17Q68EM7 881 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 ZNF571Q7Z3V5 609 aaPredicted RBP13.46□□□□□ -0.25
CMTM4-203ENST00000561680 TMTC1Q8IUR5 882 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 VPS52Q8N1B4 723 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 LNX1Q8TBB1 728 aaPredicted RBP13.46□□□□□ -0.25
CMTM4-203ENST00000561680 ZNF606Q8WXB4 792 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 RIN2Q8WYP3 895 aaPredicted RBP13.46□□□□□ -0.25
CMTM4-203ENST00000561680 HEXIM2Q96MH2 286 aaKnown RBP13.46□□□□□ -0.25
CMTM4-203ENST00000561680 C11orf84Q9BUA3 381 aaPredicted RBP13.46□□□□□ -0.25
CMTM4-203ENST00000561680 KCNF1Q9H3M0 494 aa13.46□□□□□ -0.25
CMTM4-203ENST00000561680 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
CMTM4-203ENST00000561680 TRANK1O15050 2925 aa13.46□□□□□ -0.26
CMTM4-203ENST00000561680 C2orf16Q68DN1 1984 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 SOWAHDA6NJG2 315 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 O00370 1275 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 MED7O43513 233 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 ATP2C2O75185 946 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 URODP06132 367 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 MMEP08473 750 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 CTSAP10619 480 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 DNAJB2P25686 324 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 EIF4A3P38919 411 aaKnown RBP13.45□□□□□ -0.26
CMTM4-203ENST00000561680 STILQ15468 1287 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 CCDC142Q17RM4 750 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 ASTE1Q2TB18 679 aaPredicted RBP13.45□□□□□ -0.26
CMTM4-203ENST00000561680 MDH1BQ5I0G3 518 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 TAF3Q5VWG9 929 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 PPP2R2DQ66LE6 453 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 KIAA1841Q6NSI8 718 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 FAM171BQ6P995 826 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 PRSS55Q6UWB4 352 aaPredicted RBP13.45□□□□□ -0.26
CMTM4-203ENST00000561680 C12orf29Q8N999 325 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 MYCBPAPQ8TBZ2 947 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 SPPL3Q8TCT6 385 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 TMEM209Q96SK2 561 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 AGPAT1Q99943 283 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 LPIN3Q9BQK8 851 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 ZCWPW1Q9H0M4 648 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 NHEJ1Q9H9Q4 299 aaPredicted RBP13.45□□□□□ -0.26
CMTM4-203ENST00000561680 FAM49BQ9NUQ9 324 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 PUF60Q9UHX1 559 aaKnown RBP13.45□□□□□ -0.26
CMTM4-203ENST00000561680 MTUS1Q9ULD2 1270 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 PCDHGC3Q9UN70 934 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 BACE2Q9Y5Z0 518 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 LAMA3Q16787 3333 aa13.45□□□□□ -0.26
CMTM4-203ENST00000561680 MYBPHLA2RUH7 354 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 NRDCO43847 1150 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 CCDC130P13994 396 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 CREMQ03060 361 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 BMS1Q14692 1282 aaKnown RBP13.44□□□□□ -0.26
CMTM4-203ENST00000561680 PTPN14Q15678 1187 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 MAPRE1Q15691 268 aaKnown RBP13.44□□□□□ -0.26
CMTM4-203ENST00000561680 CNGA2Q16280 664 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 PPP1R26Q5T8A7 1209 aaPredicted RBP13.44□□□□□ -0.26
CMTM4-203ENST00000561680 SLC8B1Q6J4K2 584 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 LCLAT1Q6UWP7 414 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 RSPO2Q6UXX9 243 aaPredicted RBP13.44□□□□□ -0.26
CMTM4-203ENST00000561680 LRRTM3Q86VH5 581 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 VPS36Q86VN1 386 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 CCDC170Q8IYT3 715 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 FBXO22Q8NEZ5 403 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 HNRNPABQ99729 332 aaKnown RBP13.44□□□□□ -0.26
CMTM4-203ENST00000561680 ALG13Q9NP73 1137 aaKnown RBP13.44□□□□□ -0.26
CMTM4-203ENST00000561680 TLR9Q9NR96 1032 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 TMLHEQ9NVH6 421 aa13.44□□□□□ -0.26
CMTM4-203ENST00000561680 H3BNC9 293 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 DDX3XO00571 662 aaKnown RBP eCLIP13.43□□□□□ -0.26
CMTM4-203ENST00000561680 C2CD2LO14523 706 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 FSCN2O14926 492 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 ARHGAP6O43182 974 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 LILRB3O75022 631 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 MICAL2O94851 1124 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 CFHP08603 1231 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 OR4Q2P0C623 313 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 TNFAIP3P21580 790 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 DNAJB1P25685 340 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 KIF11P52732 1056 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 SLC18A3Q16572 532 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 GOLGA7BQ2TAP0 167 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 LRIT3Q3SXY7 679 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 SLC39A12Q504Y0 691 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 RAD9BQ6WBX8 426 aa13.43□□□□□ -0.26
CMTM4-203ENST00000561680 TRIM72Q6ZMU5 477 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms