RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MAPRE1Q15691 268 aaKnown RBP10.92□□□□□ -0.66
USP3-219ENST00000561326 PASD1Q8IV76 773 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 MCOLN2Q8IZK6 566 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 LRRC43Q8N309 656 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 SLC35F6Q8N357 371 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 B3GALNT2Q8NCR0 500 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 C3orf58Q8NDZ4 430 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 RABGGTAQ92696 567 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 ZNF653Q96CK0 615 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 NAPGQ99747 312 aaPredicted RBP10.92□□□□□ -0.66
USP3-219ENST00000561326 ACBD6Q9BR61 282 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 SYNCQ9H7C4 482 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 AVENQ9NQS1 362 aaPredicted RBP10.92□□□□□ -0.66
USP3-219ENST00000561326 PARVAQ9NVD7 372 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 DDX43Q9NXZ2 648 aaKnown RBP10.92□□□□□ -0.66
USP3-219ENST00000561326 WDR35Q9P2L0 1181 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 CACNG4Q9UBN1 327 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 CNOT8Q9UFF9 292 aaKnown RBP10.92□□□□□ -0.66
USP3-219ENST00000561326 HMGXB4Q9UGU5 601 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 LCMT1Q9UIC8 334 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 ADAM28Q9UKQ2 775 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 CDH9Q9ULB4 789 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 PCDHB8Q9UN66 801 aa10.92□□□□□ -0.66
USP3-219ENST00000561326 BRCA2P51587 3418 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 SYN3O14994 580 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 URI1O94763 535 aaPredicted RBP10.91□□□□□ -0.66
USP3-219ENST00000561326 MTA2O94776 668 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 CFHP08603 1231 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 MMP8P22894 467 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 ITGB8P26012 769 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 SSTR3P32745 418 aaPredicted RBP10.91□□□□□ -0.66
USP3-219ENST00000561326 BRCC3P46736 316 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 TSPY1Q01534 308 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 TAP1Q03518 808 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 YWHAHQ04917 246 aaPredicted RBP10.91□□□□□ -0.66
USP3-219ENST00000561326 ORC1Q13415 861 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 GOLGA7BQ2TAP0 167 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 PAN2Q504Q3 1202 aaKnown RBP10.91□□□□□ -0.66
USP3-219ENST00000561326 SPOUT1Q5T280 376 aaKnown RBP10.91□□□□□ -0.66
USP3-219ENST00000561326 PPP1R26Q5T8A7 1209 aaPredicted RBP10.91□□□□□ -0.66
USP3-219ENST00000561326 OVOS1Q6IE37 1185 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 DENND1BQ6P3S1 775 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 C12orf29Q8N999 325 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 ANKRD52Q8NB46 1076 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 TPCN2Q8NHX9 752 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 HASPINQ8TF76 798 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 STK32AQ8WU08 396 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 C18orf8Q96DM3 657 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 WDR24Q96S15 920 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 HNRNPABQ99729 332 aaKnown RBP10.91□□□□□ -0.66
USP3-219ENST00000561326 LBHD1Q9BQE6 289 aaPredicted RBP10.91□□□□□ -0.66
USP3-219ENST00000561326 ZSWIM1Q9BR11 485 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 MED10Q9BTT4 135 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 OXCT2Q9BYC2 517 aaPredicted RBP10.91□□□□□ -0.66
USP3-219ENST00000561326 FAM49BQ9NUQ9 324 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 DNAJB4Q9UDY4 337 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 TSPAN16Q9UKR8 245 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 PRG3Q9Y2Y8 225 aaPredicted RBP10.91□□□□□ -0.66
USP3-219ENST00000561326 SCINQ9Y6U3 715 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 VWA8A3KMH1 1905 aa10.91□□□□□ -0.66
USP3-219ENST00000561326 SF3B1O75533 1304 aaKnown RBP eCLIP10.9□□□□□ -0.661e-6■■■■■ 175.4
USP3-219ENST00000561326 PTPRDP23468 1912 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 PALMO75781 387 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 GALTP07902 379 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 ACRP10323 421 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 GPD2P43304 727 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 ACADSBP45954 432 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 GATMP50440 423 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 BCAT1P54687 386 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 BCAR1P56945 870 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 WDR5P61964 334 aaKnown RBP10.9□□□□□ -0.66
USP3-219ENST00000561326 BST2Q10589 180 aaKnown RBP10.9□□□□□ -0.66
USP3-219ENST00000561326 ZNF268Q14587 947 aaPredicted RBP10.9□□□□□ -0.66
USP3-219ENST00000561326 CD300LGQ6UXG3 332 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 MMS22LQ6ZRQ5 1243 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 MON1BQ7L1V2 547 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 DAAM2Q86T65 1068 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 OSTM1Q86WC4 334 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 DNAAF5Q86Y56 855 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 C7orf61Q8IZ16 206 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 WDTC1Q8N5D0 677 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 C1orf131Q8NDD1 294 aaKnown RBP10.9□□□□□ -0.66
USP3-219ENST00000561326 UBA3Q8TBC4 463 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 IPO4Q8TEX9 1081 aaKnown RBP10.9□□□□□ -0.66
USP3-219ENST00000561326 BADQ92934 168 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 VWCEQ96DN2 955 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 SYT15Q9BQS2 421 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 C11orf70Q9BRQ4 267 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 NUP85Q9BW27 656 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 DPEP3Q9H4B8 488 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 CYLDQ9NQC7 956 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 SALL4Q9UJQ4 1053 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 PCDHGC5Q9Y5F6 944 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 TIMM13Q9Y5L4 95 aaPredicted RBP10.9□□□□□ -0.66
USP3-219ENST00000561326 TSC2P49815 1807 aa10.9□□□□□ -0.66
USP3-219ENST00000561326 ZBBXA8MT70 800 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 H7C4K7 107 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 I3L4J1 428 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 MYO1FO00160 1098 aa10.89□□□□□ -0.67
USP3-219ENST00000561326 OAZ2O95190 189 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms