RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 FAM46DQ8NEK8 389 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 TBC1D5Q92609 795 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 SEMA4CQ9C0C4 833 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 PCDH12Q9NPG4 1184 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 HESX1Q9UBX0 185 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 PCDHA1Q9Y5I3 950 aa4.72□□□□□ -1.65
CASC4-211ENST00000561305 DCLK1O15075 740 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 TLR5O60602 858 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 DNAJB5O75953 348 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 JTBO76095 146 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 ERBB2P04626 1255 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 PDHA1P08559 390 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 PIM1P11309 404 aaPredicted RBP4.71□□□□□ -1.66
CASC4-211ENST00000561305 ALDH9A1P49189 494 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 EIF2B5Q13144 721 aaKnown RBP4.71□□□□□ -1.66
CASC4-211ENST00000561305 SLC44A4Q53GD3 710 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 ICE2Q659A1 982 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 MAVSQ7Z434 540 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 WDR53Q7Z5U6 358 aaPredicted RBP4.71□□□□□ -1.66
CASC4-211ENST00000561305 SLC46A1Q96NT5 459 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 GTPBP4Q9BZE4 634 aaKnown RBP4.71□□□□□ -1.66
CASC4-211ENST00000561305 TCF7L1Q9HCS4 588 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 SH2B3Q9UQQ2 575 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 COL4A3BPQ9Y5P4 624 aa4.71□□□□□ -1.66
CASC4-211ENST00000561305 H0YIZ8 118 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 SLC16A3O15427 465 aaKnown RBP4.7□□□□□ -1.66
CASC4-211ENST00000561305 ATXN1LP0C7T5 689 aaKnown RBP4.7□□□□□ -1.66
CASC4-211ENST00000561305 AKAP5P24588 427 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 LIPAP38571 399 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 LOXL3P58215 753 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 EXOSC9Q06265 439 aaKnown RBP4.7□□□□□ -1.66
CASC4-211ENST00000561305 PLS1Q14651 629 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 PGS1Q32NB8 556 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 TMEM119Q4V9L6 283 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 C11orf87Q6NUJ2 197 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 CATIPQ7Z7H3 387 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.7□□□□□ -1.66
CASC4-211ENST00000561305 HSPBAP1Q96EW2 488 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 DLL3Q9NYJ7 618 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 SSX2IPQ9Y2D8 614 aa4.7□□□□□ -1.66
CASC4-211ENST00000561305 TISP43B9A030 160 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 IL33O95760 270 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 ONECUT2O95948 504 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 IL6RP08887 468 aaPredicted RBP4.69□□□□□ -1.66
CASC4-211ENST00000561305 PRR35P0CG20 571 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 NHLRC4P0CG21 123 aaPredicted RBP4.69□□□□□ -1.66
CASC4-211ENST00000561305 HDCP19113 662 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 CERS1P27544 350 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 PPIFP30405 207 aaKnown RBP4.69□□□□□ -1.66
CASC4-211ENST00000561305 LONRF3Q496Y0 759 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 MTX3Q5HYI7 312 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 LCE1AQ5T7P2 110 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 SLC29A4Q7RTT9 530 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 ZNF804AQ7Z570 1209 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 Q8N9P0 234 aaPredicted RBP4.69□□□□□ -1.66
CASC4-211ENST00000561305 BRIX1Q8TDN6 353 aaKnown RBP4.69□□□□□ -1.66
CASC4-211ENST00000561305 CHMP4CQ96CF2 233 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 MVB12AQ96EY5 273 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 PTDSS2Q9BVG9 487 aa4.69□□□□□ -1.66
CASC4-211ENST00000561305 H3BUI4 141 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 MYO1FO00160 1098 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 ITGB6P18564 788 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 VCAM1P19320 739 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 TUBA4AP68366 448 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 SP2Q02086 613 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 IQCB1Q15051 598 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 BRDTQ58F21 947 aaPredicted RBP4.68□□□□□ -1.66
CASC4-211ENST00000561305 TREML2Q5T2D2 321 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 ZNF626Q68DY1 528 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 ZNF66Q6ZN08 573 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 FANCBQ8NB91 859 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 SLC35A4Q96G79 324 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 CDK5RAP3Q96JB5 506 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 NUP88Q99567 741 aaPredicted RBP4.68□□□□□ -1.66
CASC4-211ENST00000561305 TTYH3Q9C0H2 523 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 DUSP22Q9NRW4 184 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 HOMER2Q9NSB8 354 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 SH3BP4Q9P0V3 963 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 BTBD3Q9Y2F9 522 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 PLEKHM1Q9Y4G2 1056 aa4.68□□□□□ -1.66
CASC4-211ENST00000561305 TP73O15350 636 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 KELP23276 732 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 CYP2C18P33260 490 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 VIPR2P41587 438 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 PXNP49023 591 aaPredicted RBP4.67□□□□□ -1.66
CASC4-211ENST00000561305 SOX8P57073 446 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 EEFSECP57772 596 aaKnown RBP4.67□□□□□ -1.66
CASC4-211ENST00000561305 AMOTQ4VCS5 1084 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 LAYNQ6UX15 382 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 NEK8Q86SG6 692 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 ZBTB46Q86UZ6 589 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 RP9Q8TA86 221 aaKnown RBP4.67□□□□□ -1.66
CASC4-211ENST00000561305 ATG4AQ8WYN0 398 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 HPS3Q969F9 1004 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 PUS7Q96PZ0 661 aaKnown RBP4.67□□□□□ -1.66
CASC4-211ENST00000561305 BRINP2Q9C0B6 783 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 SERTAD3Q9UJW9 196 aa4.67□□□□□ -1.66
CASC4-211ENST00000561305 LUC7L2Q9Y383 392 aaKnown RBP4.67□□□□□ -1.66
CASC4-211ENST00000561305 KRTAP29-1A8MX34 341 aaPredicted RBP4.66□□□□□ -1.66
CASC4-211ENST00000561305 QSOX1O00391 747 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms