RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 NOTCH4Q99466 2003 aa21.3■■□□□ 1
TSPAN3-210ENST00000561277 A8MXQ7 604 aa21.29■■□□□ 1
TSPAN3-210ENST00000561277 STX10O60499 249 aa21.29■■□□□ 1
TSPAN3-210ENST00000561277 HAPLN1P10915 354 aaPredicted RBP21.29■■□□□ 1
TSPAN3-210ENST00000561277 P4HA1P13674 534 aa21.29■■□□□ 1
TSPAN3-210ENST00000561277 ATF6P18850 670 aa21.29■■□□□ 1
TSPAN3-210ENST00000561277 GTF2H1P32780 548 aa21.29■■□□□ 1
TSPAN3-210ENST00000561277 PTPN21Q16825 1174 aa21.29■■□□□ 1
TSPAN3-210ENST00000561277 CCDC40Q4G0X9 1142 aa21.29■■□□□ 1
TSPAN3-210ENST00000561277 FGF13Q92913 245 aa21.29■■□□□ 1
TSPAN3-210ENST00000561277 CDH7Q9ULB5 785 aa21.29■■□□□ 1
TSPAN3-210ENST00000561277 DOCK8Q8NF50 2099 aa21.29■■□□□ 1
TSPAN3-210ENST00000561277 MYL4P12829 197 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 LAMP2P13473 410 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 NOP14P78316 857 aaKnown RBP21.28■■□□□ 1
TSPAN3-210ENST00000561277 CBWD6Q4V339 395 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 CBWD3Q5JTY5 395 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 CBWD5Q5RIA9 395 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 CYP4A22Q5TCH4 519 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 FILIP1Q7Z7B0 1213 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 SPATA2LQ8IUW3 424 aaPredicted RBP21.28■■□□□ 1
TSPAN3-210ENST00000561277 NPAS3Q8IXF0 933 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 GPR152Q8TDT2 470 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 GIPC2Q8TF65 315 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 TAF4BQ92750 862 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 TCEAL4Q96EI5 215 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 SDCBP2Q9H190 292 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 DPEP3Q9H4B8 488 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 CRTAC1Q9NQ79 661 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 EPS15L1Q9UBC2 864 aa21.28■■□□□ 1
TSPAN3-210ENST00000561277 LRRN2O75325 713 aa21.27■■□□□ 1
TSPAN3-210ENST00000561277 CEBPBP17676 345 aa21.27■■□□□ 1
TSPAN3-210ENST00000561277 CYP2F1P24903 491 aa21.27■■□□□ 1
TSPAN3-210ENST00000561277 CCR2P41597 374 aa21.27■■□□□ 1
TSPAN3-210ENST00000561277 GPR15P49685 360 aa21.27■■□□□ 1
TSPAN3-210ENST00000561277 VEPH1Q14D04 833 aa21.27■■□□□ 1
TSPAN3-210ENST00000561277 MYLPFQ96A32 169 aa21.27■■□□□ 1
TSPAN3-210ENST00000561277 METTL14Q9HCE5 456 aaKnown RBP21.27■■□□□ 1
TSPAN3-210ENST00000561277 FAM86C2PA6NEL3 165 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 NRG2O14511 850 aaPredicted RBP21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 GJA1P17302 382 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 ASPAP45381 313 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 MCCD1P59942 119 aaPredicted RBP21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 CYP27A1Q02318 531 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 MDH1BQ5I0G3 518 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 PRSS36Q5K4E3 855 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 FAM171BQ6P995 826 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 FOXR2Q6PJQ5 311 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 FRMD5Q7Z6J6 570 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 DNAJB7Q7Z6W7 309 aaPredicted RBP21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 CCDC150Q8NCX0 1101 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 STKLD1Q8NE28 680 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 FBXL13Q8NEE6 735 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 RSAD2Q8WXG1 361 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 SEMA4DQ92854 862 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 PSMG2Q969U7 264 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 SMOC2Q9H3U7 446 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 KCNK12Q9HB15 430 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 APOBEC3GQ9HC16 384 aaKnown RBP21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 AVENQ9NQS1 362 aaPredicted RBP21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 RWDD2AQ9UIY3 292 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 ASB3Q9Y575 518 aa21.27■□□□□ 0.99
TSPAN3-210ENST00000561277 ZNF197O14709 1029 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 FAM163BP0C2L3 166 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 MTMR3Q13615 1198 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 MAPRE1Q15691 268 aaKnown RBP21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 DDR2Q16832 855 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 DPCR1Q3MIW9 517 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 SDHAF4Q5VUM1 108 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 C4orf50Q6ZRC1 276 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 ITIH5Q86UX2 942 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 TMC8Q8IU68 726 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 MLKLQ8NB16 471 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 SLC35C1Q96A29 364 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 MCRS1Q96EZ8 462 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 PCED1BQ96HM7 432 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 SRRTQ9BXP5 876 aaKnown RBP21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 ABCB6Q9NP58 842 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 SORCS3Q9UPU3 1222 aa21.26■□□□□ 0.99
TSPAN3-210ENST00000561277 EPHA5P54756 1037 aa21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 TAF12Q16514 161 aa21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 CFAP221Q4G0U5 840 aa21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 SCN4BQ8IWT1 228 aa21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 LEMD2Q8NC56 503 aa21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 B3GALNT2Q8NCR0 500 aa21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 MYCBPAPQ8TBZ2 947 aa21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 EDAQ92838 391 aa21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 FUBP3Q96I24 572 aaKnown RBP eCLIP21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 NIF3L1Q9GZT8 377 aa21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 ZNF334Q9HCZ1 680 aaPredicted RBP21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 RAB20Q9NX57 234 aa21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 MAGEC2Q9UBF1 373 aaPredicted RBP21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 ZFP37Q9Y6Q3 630 aaPredicted RBP21.25■□□□□ 0.99
TSPAN3-210ENST00000561277 A0A1W2PRU2 124 aa21.24■□□□□ 0.99
TSPAN3-210ENST00000561277 PTPN1P18031 435 aaKnown RBP21.24■□□□□ 0.99
TSPAN3-210ENST00000561277 BDNFP23560 247 aa21.24■□□□□ 0.99
TSPAN3-210ENST00000561277 ZXDAP98168 799 aa21.24■□□□□ 0.99
TSPAN3-210ENST00000561277 ORC1Q13415 861 aa21.24■□□□□ 0.99
TSPAN3-210ENST00000561277 LRRC3Q9BY71 257 aa21.24■□□□□ 0.99
TSPAN3-210ENST00000561277 IGSF9Q9P2J2 1179 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms