RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 ADAM15Q13444 863 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 INTS6LQ5JSJ4 861 aaKnown RBP10.96□□□□□ -0.65
LRRC28-221ENST00000561276 TPGS2Q68CL5 300 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 IQCEQ6IPM2 695 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 FAM171BQ6P995 826 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 UBR7Q8N806 425 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 NEK11Q8NG66 645 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 MYCBPAPQ8TBZ2 947 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 SLC22A17Q8WUG5 538 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 JAKMIP2Q96AA8 810 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 TMEM176AQ96HP8 235 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 TNIP3Q96KP6 325 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 PGLYRP2Q96PD5 576 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 TWNKQ96RR1 684 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 CDCA3Q99618 268 aaPredicted RBP10.96□□□□□ -0.65
LRRC28-221ENST00000561276 SYT15Q9BQS2 421 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 NT5C1AQ9BXI3 368 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 DPEP3Q9H4B8 488 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 CRTAC1Q9NQ79 661 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 FAM207AQ9NSI2 230 aaPredicted RBP10.96□□□□□ -0.65
LRRC28-221ENST00000561276 TMLHEQ9NVH6 421 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 HMGXB4Q9UGU5 601 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 AJAP1Q9UKB5 411 aaPredicted RBP10.96□□□□□ -0.65
LRRC28-221ENST00000561276 PCDHB4Q9Y5E5 795 aa10.96□□□□□ -0.65
LRRC28-221ENST00000561276 PTPRDP23468 1912 aa10.96□□□□□ -0.66
LRRC28-221ENST00000561276 FOXN3O00409 490 aaPredicted RBP10.95□□□□□ -0.66
LRRC28-221ENST00000561276 EPHB6O15197 1021 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 CBFA2T2O43439 604 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 GLUD1P00367 558 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 C1RP00736 705 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 TPM3P06753 285 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 EPCAMP16422 314 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 RAD23BP54727 409 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 POLR2FP61218 127 aaKnown RBP10.95□□□□□ -0.66
LRRC28-221ENST00000561276 PSMC1P62191 440 aaKnown RBP10.95□□□□□ -0.66
LRRC28-221ENST00000561276 RBM10P98175 930 aaKnown RBP10.95□□□□□ -0.66
LRRC28-221ENST00000561276 ADCY1Q08828 1119 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 RAPGEF1Q13905 1077 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 KCNC3Q14003 757 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 GSE1Q14687 1217 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 LLGL2Q6P1M3 1020 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 SARM1Q6SZW1 724 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 TMEM270Q6UE05 265 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 C12orf29Q8N999 325 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 SLC4A11Q8NBS3 891 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 B3GALNT2Q8NCR0 500 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 PPM1EQ8WY54 764 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 HEXIM2Q96MH2 286 aaKnown RBP10.95□□□□□ -0.66
LRRC28-221ENST00000561276 PKMYT1Q99640 499 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 NAA15Q9BXJ9 866 aaKnown RBP10.95□□□□□ -0.66
LRRC28-221ENST00000561276 TRIM5Q9C035 493 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 ELOVL4Q9GZR5 314 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 DNAI2Q9GZS0 605 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 GANQ9H2C0 597 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 NLRC4Q9NPP4 1024 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 CNTN6Q9UQ52 1028 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 HCFC2Q9Y5Z7 792 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 FHOD1Q9Y613 1164 aa10.95□□□□□ -0.66
LRRC28-221ENST00000561276 LINC01565O15544 149 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 NCK2O43639 380 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 SEC24AO95486 1093 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 VNN2O95498 520 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 KRT5P13647 590 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 TRIM21P19474 475 aaKnown RBP10.94□□□□□ -0.66
LRRC28-221ENST00000561276 ELF1P32519 619 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 PBX1P40424 430 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 USP8P40818 1118 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 CYP27A1Q02318 531 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 SMARCB1Q12824 385 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 DUSP4Q13115 394 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 DRAP1Q14919 205 aaPredicted RBP10.94□□□□□ -0.66
LRRC28-221ENST00000561276 MAPRE1Q15691 268 aaKnown RBP10.94□□□□□ -0.66
LRRC28-221ENST00000561276 NFE2Q16621 373 aaPredicted RBP10.94□□□□□ -0.66
LRRC28-221ENST00000561276 CCDC142Q17RM4 750 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 MDH1BQ5I0G3 518 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 TMEM184AQ6ZMB5 413 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 TCEAL8Q8IYN2 117 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 EFHBQ8N7U6 833 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 ATAD1Q8NBU5 361 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 KREMEN2Q8NCW0 462 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 VN1R2Q8NFZ6 395 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 C2orf15Q8WU43 125 aaKnown RBP10.94□□□□□ -0.66
LRRC28-221ENST00000561276 SHC3Q92529 594 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 CYFIP2Q96F07 1278 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 PCED1BQ96HM7 432 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 B3GNT5Q9BYG0 378 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 STK33Q9BYT3 514 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 PLEKHA4Q9H4M7 779 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 AFF4Q9UHB7 1163 aaKnown RBP10.94□□□□□ -0.66
LRRC28-221ENST00000561276 DPP7Q9UHL4 492 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 KIAA1257Q9ULG3 409 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 MAFFQ9ULX9 164 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 SLC27A5Q9Y2P5 690 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 PCDHB5Q9Y5E4 795 aa10.94□□□□□ -0.66
LRRC28-221ENST00000561276 FSD2A1L4K1 749 aa10.93□□□□□ -0.66
LRRC28-221ENST00000561276 MTMR11A4FU01 709 aa10.93□□□□□ -0.66
LRRC28-221ENST00000561276 PRRG1O14668 218 aa10.93□□□□□ -0.66
LRRC28-221ENST00000561276 GLP2RO95838 553 aa10.93□□□□□ -0.66
LRRC28-221ENST00000561276 PAEPP09466 180 aa10.93□□□□□ -0.66
LRRC28-221ENST00000561276 RFX1P22670 979 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms