RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 IRF2BP1Q8IU81 584 aa14.87□□□□□ -0.03
TPM1-230ENST00000561266 ZDHHC14Q8IZN3 488 aa14.87□□□□□ -0.03
TPM1-230ENST00000561266 TDRD5Q8NAT2 981 aaKnown RBP14.87□□□□□ -0.03
TPM1-230ENST00000561266 OR6B3Q8NGW1 331 aa14.87□□□□□ -0.03
TPM1-230ENST00000561266 SPATA18Q8TC71 538 aa14.87□□□□□ -0.03
TPM1-230ENST00000561266 GIPC2Q8TF65 315 aa14.87□□□□□ -0.03
TPM1-230ENST00000561266 TATDN2Q93075 761 aa14.87□□□□□ -0.03
TPM1-230ENST00000561266 SEPT5Q99719 369 aaPredicted RBP14.87□□□□□ -0.03
TPM1-230ENST00000561266 RPP25Q9BUL9 199 aaKnown RBP14.87□□□□□ -0.03
TPM1-230ENST00000561266 C11orf16Q9NQ32 467 aa14.87□□□□□ -0.03
TPM1-230ENST00000561266 MAFFQ9ULX9 164 aa14.87□□□□□ -0.03
TPM1-230ENST00000561266 USTQ9Y2C2 406 aa14.87□□□□□ -0.03
TPM1-230ENST00000561266 R3HCC1Q9Y3T6 440 aaKnown RBP14.87□□□□□ -0.03
TPM1-230ENST00000561266 ANAPC1Q9H1A4 1944 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 MYH10P35580 1976 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 PI4K2BG5E9Z4 385 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 GBP2P32456 591 aaPredicted RBP14.86□□□□□ -0.03
TPM1-230ENST00000561266 GTF2H1P32780 548 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 CACNA2D1P54289 1103 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 NLRP12P59046 1061 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 TSPY1Q01534 308 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 MTMR3Q13615 1198 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 DDR2Q16832 855 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 MGAT5BQ3V5L5 792 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 TCERG1LQ5VWI1 586 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 KRT39Q6A163 491 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 FOXR2Q6PJQ5 311 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 RBM43Q6ZSC3 357 aaKnown RBP14.86□□□□□ -0.03
TPM1-230ENST00000561266 FRMD5Q7Z6J6 570 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 DCP1BQ8IZD4 617 aaKnown RBP14.86□□□□□ -0.03
TPM1-230ENST00000561266 FGF13Q92913 245 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 MYLPFQ96A32 169 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 ZSWIM3Q96MP5 696 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 TWNKQ96RR1 684 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 BCO2Q9BYV7 579 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 ARMCX3Q9UH62 379 aaPredicted RBP14.86□□□□□ -0.03
TPM1-230ENST00000561266 RWDD2AQ9UIY3 292 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 CDH9Q9ULB4 789 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 NR2E1Q9Y466 385 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 PCDHB5Q9Y5E4 795 aa14.86□□□□□ -0.03
TPM1-230ENST00000561266 CLDN5O00501 218 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 FAM163BP0C2L3 166 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 LAMP2P13473 410 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 PTPN1P18031 435 aaKnown RBP14.85□□□□□ -0.03
TPM1-230ENST00000561266 PPP1R2P41236 205 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 MXI1P50539 228 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 EPHA5P54756 1037 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 NOP14P78316 857 aaKnown RBP14.85□□□□□ -0.03
TPM1-230ENST00000561266 MDH1BQ5I0G3 518 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 PAQR9Q6ZVX9 377 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 OTOP3Q7RTS5 596 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 DNAJB7Q7Z6W7 309 aaPredicted RBP14.85□□□□□ -0.03
TPM1-230ENST00000561266 NPAS3Q8IXF0 933 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 SPPL2BQ8TCT7 592 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 WHAMMQ8TF30 809 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 MCRS1Q96EZ8 462 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 PCED1BQ96HM7 432 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 ARID3AQ99856 593 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 B3GNT5Q9BYG0 378 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 SNX25Q9H3E2 840 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 IL21Q9HBE4 155 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 AVENQ9NQS1 362 aaPredicted RBP14.85□□□□□ -0.03
TPM1-230ENST00000561266 RAB20Q9NX57 234 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 TMEM63CQ9P1W3 806 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 EPS15L1Q9UBC2 864 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 HSFX1Q9UBD0 423 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 COQ4Q9Y3A0 265 aa14.85□□□□□ -0.03
TPM1-230ENST00000561266 BICDL2A1A5D9 508 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 FAM86C2PA6NEL3 165 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 A8MXQ7 604 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 MYL4P12829 197 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 HMGA1P17096 107 aaKnown RBP14.84□□□□□ -0.03
TPM1-230ENST00000561266 BDNFP23560 247 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 PCSK1P29120 753 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 NDST1P52848 882 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 CCDC40Q4G0X9 1142 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 STXBP5Q5T5C0 1151 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 GAREM2Q75VX8 874 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 TMEM150AQ86TG1 271 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 TRIM59Q8IWR1 403 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 MLKLQ8NB16 471 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 FBXL13Q8NEE6 735 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 LMO3Q8TAP4 145 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 SHKBP1Q8TBC3 707 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 C2orf15Q8WU43 125 aaKnown RBP14.84□□□□□ -0.03
TPM1-230ENST00000561266 TAF4BQ92750 862 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 FGF14Q92915 247 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 PSMG2Q969U7 264 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 ZNF512Q96ME7 567 aaPredicted RBP14.84□□□□□ -0.03
TPM1-230ENST00000561266 KCNK12Q9HB15 430 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 CDH7Q9ULB5 785 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 MRPS23Q9Y3D9 190 aaKnown RBP14.84□□□□□ -0.03
TPM1-230ENST00000561266 NCANO14594 1321 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 COL4A3Q01955 1670 aa14.84□□□□□ -0.03
TPM1-230ENST00000561266 ANHXE9PGG2 379 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 DCXO43602 365 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 NARSO43776 548 aaKnown RBP14.83□□□□□ -0.04
TPM1-230ENST00000561266 ALDH1A3P47895 512 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 FMO5P49326 533 aa14.83□□□□□ -0.04
TPM1-230ENST00000561266 TUFMP49411 452 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms