RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 SMYD3Q9H7B4 428 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 CRTAC1Q9NQ79 661 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 TMLHEQ9NVH6 421 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 GTF3C4Q9UKN8 822 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 PCDHB5Q9Y5E4 795 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 NCOR1O75376 2440 aa10.28□□□□□ -0.76
RABGGTA-221ENST00000561055 CCDC195A0A1B0GUA6 201 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 MYBPHLA2RUH7 354 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 A8MXQ7 604 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 H3BQ06 376 aaPredicted RBP10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 HCRTO43612 131 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 ATP2C2O75185 946 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 CILPO75339 1184 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 PDGFRBP09619 1106 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 WEE2P0C1S8 567 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 HAPLN1P10915 354 aaPredicted RBP10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 BMP1P13497 986 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 PTPN1P18031 435 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 ACAT1P24752 427 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 MTHFRP42898 656 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 MAGEA11P43364 429 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 TUFMP49411 452 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 NDST1P52848 882 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 ARPP19P56211 112 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 ZNF445P59923 1031 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 YWHAEP62258 255 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 TFF2Q03403 129 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 DUSP4Q13115 394 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 CUL2Q13617 745 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 SMAD2Q15796 467 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 EXOC3L4Q17RC7 722 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 HSP90AA4PQ58FG1 418 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 PPM1LQ5SGD2 360 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 LIN9Q5TKA1 542 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 PHLDB3Q6NSJ2 640 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 CES5AQ6NT32 575 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 DPY19L2P1Q6NXN4 242 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 TRIM65Q6PJ69 517 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 LRSAM1Q6UWE0 723 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 C4orf50Q6ZRC1 276 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 ENOSF1Q7L5Y1 443 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 CREBRFQ8IUR6 639 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 C12orf76Q8N812 135 aaPredicted RBP10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 ATAD1Q8NBU5 361 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 B3GALNT2Q8NCR0 500 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 SLC7A14Q8TBB6 771 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 MYCBPAPQ8TBZ2 947 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 WHAMMQ8TF30 809 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 ELMO3Q96BJ8 720 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 NECTIN4Q96NY8 510 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 NT5C1BQ96P26 610 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 ASB2Q96Q27 587 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 INTS2Q9H0H0 1204 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 CRISPLD1Q9H336 500 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 CYP4F11Q9HBI6 524 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 CBX8Q9HC52 389 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 AVENQ9NQS1 362 aaPredicted RBP10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 CISHQ9NSE2 258 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 GCNT4Q9P109 453 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 CNTN6Q9UQ52 1028 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 FAM50BQ9Y247 325 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 ASB3Q9Y575 518 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 INSL5Q9Y5Q6 135 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 MYO16Q9Y6X6 1858 aa10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 HELZP42694 1942 aaKnown RBP10.27□□□□□ -0.77
RABGGTA-221ENST00000561055 PRRG1O14668 218 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 RFPL2O75678 378 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 SLC9A1P19634 815 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 PON1P27169 355 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 RAP1GAPP47736 663 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 COPB1P53618 953 aaKnown RBP10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 KCNMA1Q12791 1236 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 PLD1Q13393 1074 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 CBX2Q14781 532 aaPredicted RBP10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 ATAT1Q5SQI0 421 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 RARS2Q5T160 578 aaKnown RBP10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 PTCRAQ6ISU1 281 aaPredicted RBP10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 VSTM1Q6UX27 236 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 TMC5Q6UXY8 1006 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 SCARA5Q6ZMJ2 495 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 EP400NLQ6ZTU2 488 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 ANKRD20A12PQ8NF67 263 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 FAM200AQ8TCP9 573 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 PCED1BQ96HM7 432 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 RIPOR3Q96MK2 946 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 PGLYRP2Q96PD5 576 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 NT5C1AQ9BXI3 368 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 DNAI2Q9GZS0 605 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 SIX2Q9NPC8 291 aa10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 USP15Q9Y4E8 981 aaPredicted RBP10.26□□□□□ -0.77
RABGGTA-221ENST00000561055 LGALS16A8MUM7 142 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 BECN2A8MW95 431 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 XYLBO75191 536 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 MICAL2O94851 1124 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 LRG1P02750 347 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 TPM2P07951 284 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 ATP1A3P13637 1013 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 PTPN2P17706 415 aa10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 TRIM21P19474 475 aaKnown RBP10.25□□□□□ -0.77
RABGGTA-221ENST00000561055 CDK11BP21127 795 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms