RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 UBN1Q9NPG3 1134 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 STX18Q9P2W9 335 aaKnown RBP14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 MTUS1Q9ULD2 1270 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 PAPPA2Q9BXP8 1791 aa14.72□□□□□ -0.05
RABGGTA-220ENST00000560998 CYP26A1O43174 497 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 CDH16O75309 829 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 CCDC166P0CW27 439 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 DESP17661 470 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 EMC2Q15006 297 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 RCN1Q15293 331 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 UBAP2Q5T6F2 1119 aaKnown RBP14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 RASIP1Q5U651 963 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 CCDC137Q6PK04 289 aaKnown RBP14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 ANKRD23Q86SG2 305 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 USP37Q86T82 979 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 C12orf50Q8NA57 414 aaPredicted RBP14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 FBXL13Q8NEE6 735 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 ZNF526Q8TF50 670 aaPredicted RBP14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 SLCO2A1Q92959 643 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 NT5C1BQ96P26 610 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 ZNF184Q99676 751 aaPredicted RBP14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 SYNCQ9H7C4 482 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 RAB20Q9NX57 234 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 BLOC1S6Q9UL45 172 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 MAFBQ9Y5Q3 323 aaPredicted RBP14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 SIP14410 1827 aa14.71□□□□□ -0.05
RABGGTA-220ENST00000560998 CCDC22O60826 627 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 GH1P01241 217 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 TPP2P29144 1249 aaPredicted RBP14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 ABCD1P33897 745 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 GPC5P78333 572 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 CAV1Q03135 178 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 MCL1Q07820 350 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 MPP2Q14168 576 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 SEL1L2Q5TEA6 688 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 LBX2Q6XYB7 198 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 SV2AQ7L0J3 742 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 SLC47A2Q86VL8 602 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 MORC4Q8TE76 937 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 FAM213AQ9BRX8 229 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 ZNF302Q9NR11 478 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 PHTF1Q9UMS5 762 aa14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.71□□□□□ -0.06
RABGGTA-220ENST00000560998 ZNFX1Q9P2E3 1918 aaKnown RBP14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 OTOFQ9HC10 1997 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 FAM47DPA6NHR8 397 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 PEX10O60683 326 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 TTC4O95801 387 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 OATP04181 439 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 GZMAP12544 262 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 CREB1P16220 341 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 FOXN2P32314 431 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 USP4Q13107 963 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 DBN1Q16643 649 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 KHDC1Q4VXA5 237 aaKnown RBP14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 C10orf82Q8WW14 230 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 KCNN1Q92952 543 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 ACP6Q9NPH0 428 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 GALNT8Q9NY28 637 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 BTBD7Q9P203 1132 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 UMODL1Q5DID0 1318 aa14.7□□□□□ -0.06
RABGGTA-220ENST00000560998 A8MXQ7 604 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 EXTL3O43909 919 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 PSMG1O95456 288 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 LYNP07948 512 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 DLATP10515 647 aaKnown RBP14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 COPB2P35606 906 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 COILP38432 576 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 CDK7P50613 346 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 FMO1Q01740 532 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 MAP7Q14244 749 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 LIN52Q52LA3 116 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 DLK2Q6UY11 383 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 SEPT14Q6ZU15 432 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 SYDE1Q6ZW31 735 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 RIOX2Q8IUF8 465 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 ZNF513Q8N8E2 541 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 STMN2Q93045 179 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 TMEM143Q96AN5 459 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 CCDC77Q9BR77 488 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 DHX33Q9H6R0 707 aaKnown RBP14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 MLXIPLQ9NP71 852 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 FBXO40Q9UH90 709 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 ANGPTL2Q9UKU9 493 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 G3BP2Q9UN86 482 aaKnown RBP14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 TBC1D30Q9Y2I9 924 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 IGKV6D-21A0A0A0MT36 114 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 C2CD2LO14523 706 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 HGSO14964 777 aaPredicted RBP14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 EDF1O60869 148 aaKnown RBP14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 MTA2O94776 668 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 TMCC1O94876 653 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 ECEL1O95672 775 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 FAM163BP0C2L3 166 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 CYP11B1P15538 503 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 ITIH2P19823 946 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 LIG4P49917 911 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 SPARCL1Q14515 664 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 C1QTNF12Q5T7M4 302 aa14.69□□□□□ -0.06
RABGGTA-220ENST00000560998 TTC27Q6P3X3 843 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms