RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 Q6ZUG5 572 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 SPRED1Q7Z699 444 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 RBM23Q86U06 439 aaKnown RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 SESTD1Q86VW0 696 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 FBXO16Q8IX29 292 aaPredicted RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 TET1Q8NFU7 2136 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 HNRNPLLQ8WVV9 542 aaKnown RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 IL17RAQ96F46 866 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 CDK5RAP1Q96SZ6 601 aaKnown RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 AARSD1Q9BTE6 412 aaKnown RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 BARX1Q9HBU1 254 aaPredicted RBP4.5□□□□□ -1.69
HERC1-211ENST00000560983 ERVK-5Q9HDB9 667 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 CDH22Q9UJ99 828 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 TESMINQ9Y4I5 508 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 SCN5AQ14524 2016 aa4.5□□□□□ -1.69
HERC1-211ENST00000560983 MYO7AQ13402 2215 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 ATAD5Q96QE3 1844 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 PTPRSQ13332 1948 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 CELSR3Q9NYQ7 3312 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 ASB14A6NK59 587 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 SRRM3A6NNA2 597 aaPredicted RBP4.49□□□□□ -1.69
HERC1-211ENST00000560983 MPHOSPH10O00566 681 aaKnown RBP4.49□□□□□ -1.69
HERC1-211ENST00000560983 PER2O15055 1255 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 KPNA6O60684 536 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 ITGB1P05556 798 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 C6P13671 934 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 SELENOPP49908 381 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 CPT1AP50416 773 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 GPR85P60893 370 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 TUSC3Q13454 348 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 HSP90AA2PQ14568 343 aaPredicted RBP4.49□□□□□ -1.69
HERC1-211ENST00000560983 KIZQ2M2Z5 673 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 FAM83BQ5T0W9 1011 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 TMEM179Q6ZVK1 233 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 REXO1L1PQ8IX06 675 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 CPXCR1Q8N123 301 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 ST13P5Q8NFI4 369 aaPredicted RBP4.49□□□□□ -1.69
HERC1-211ENST00000560983 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.49□□□□□ -1.69
HERC1-211ENST00000560983 Q8TCH9 128 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 MORC4Q8TE76 937 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 KAT2BQ92831 832 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 KISS1RQ969F8 398 aaPredicted RBP4.49□□□□□ -1.69
HERC1-211ENST00000560983 ZNF669Q96BR6 464 aaPredicted RBP4.49□□□□□ -1.69
HERC1-211ENST00000560983 SORCS2Q96PQ0 1159 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 NOL10Q9BSC4 688 aaKnown RBP4.49□□□□□ -1.69
HERC1-211ENST00000560983 ZNF747Q9BV97 191 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 WDR11Q9BZH6 1224 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 TLE6Q9H808 572 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 RAVER2Q9HCJ3 691 aaKnown RBP4.49□□□□□ -1.69
HERC1-211ENST00000560983 DLGAP2Q9P1A6 1054 aa4.49□□□□□ -1.69
HERC1-211ENST00000560983 PA2G4Q9UQ80 394 aaKnown RBP4.49□□□□□ -1.69
HERC1-211ENST00000560983 DMXL2Q8TDJ6 3036 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 MYH2Q9UKX2 1941 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 CDK5RAP2Q96SN8 1893 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 ZNF839A8K0R7 811 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 E9PSI1 815 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 ACOT7O00154 380 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 NKRFO15226 690 aaKnown RBP eCLIP4.48□□□□□ -1.69
HERC1-211ENST00000560983 IL18BPO95998 194 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 LTFP02788 710 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 CKMP06732 381 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 EEF2P13639 858 aaKnown RBP4.48□□□□□ -1.69
HERC1-211ENST00000560983 AKR1B1P15121 316 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 GRIN1Q05586 938 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 MVPQ14764 893 aaKnown RBP4.48□□□□□ -1.69
HERC1-211ENST00000560983 DUSP6Q16828 381 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 SKIDA1Q1XH10 827 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 CD276Q5ZPR3 534 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 ANKRD54Q6NXT1 300 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 KCNT2Q6UVM3 1135 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 UNQ6494/PRO21346Q6UXR6 183 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 USP53Q70EK8 1073 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 C1orf210Q8IVY1 113 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 POF1BQ8WVV4 589 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 PPP2R3CQ969Q6 453 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 ZNF689Q96CS4 500 aaPredicted RBP4.48□□□□□ -1.69
HERC1-211ENST00000560983 NUP88Q99567 741 aaPredicted RBP4.48□□□□□ -1.69
HERC1-211ENST00000560983 SLF1Q9BQI6 1058 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 APOL5Q9BWW9 433 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 IFIH1Q9BYX4 1025 aaKnown RBP4.48□□□□□ -1.69
HERC1-211ENST00000560983 SCAND2PQ9GZW5 306 aaPredicted RBP4.48□□□□□ -1.69
HERC1-211ENST00000560983 SLC38A10Q9HBR0 1119 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 VTA1Q9NP79 307 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 A1CFQ9NQ94 594 aaKnown RBP4.48□□□□□ -1.69
HERC1-211ENST00000560983 NCDNQ9UBB6 729 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 FBXO40Q9UH90 709 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 NR2E1Q9Y466 385 aa4.48□□□□□ -1.69
HERC1-211ENST00000560983 SIP14410 1827 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 CYR61O00622 381 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 WNT9AO14904 365 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 KINO60870 393 aaKnown RBP4.47□□□□□ -1.69
HERC1-211ENST00000560983 ZBED4O75132 1171 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 SLPIP03973 132 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 DCNP07585 359 aaKnown RBP4.47□□□□□ -1.69
HERC1-211ENST00000560983 ENO2P09104 434 aaPredicted RBP4.47□□□□□ -1.69
HERC1-211ENST00000560983 PABPC1P11940 636 aaKnown RBP4.47□□□□□ -1.69
HERC1-211ENST00000560983 GLULP15104 373 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 ICA1Q05084 483 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 TFCP2Q12800 502 aa4.47□□□□□ -1.69
HERC1-211ENST00000560983 NAALADL2Q58DX5 795 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms