RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 RPLP0P6Q8NHW5 317 aa20.04■□□□□ 0.8
TPM1-226ENST00000560959 ASB7Q9H672 318 aa20.04■□□□□ 0.8
TPM1-226ENST00000560959 PCDHB6Q9Y5E3 794 aa20.04■□□□□ 0.8
TPM1-226ENST00000560959 KIF26AQ9ULI4 1882 aaPredicted RBP20.04■□□□□ 0.8
TPM1-226ENST00000560959 SPEGQ15772 3267 aa20.04■□□□□ 0.8
TPM1-226ENST00000560959 LNP1A1A4G5 178 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 CYB561D2O14569 222 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 GIPC1O14908 333 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 HNRNPDLO14979 420 aaKnown RBP20.03■□□□□ 0.8
TPM1-226ENST00000560959 KHNYNO15037 678 aaKnown RBP20.03■□□□□ 0.8
TPM1-226ENST00000560959 CSH1P0DML2 217 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 CSH2P0DML3 217 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 ARSAP15289 507 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 POU5F1Q01860 360 aaKnown RBP20.03■□□□□ 0.8
TPM1-226ENST00000560959 ZNF252P-AS1Q0IIN9 211 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 COL9A2Q14055 689 aaPredicted RBP20.03■□□□□ 0.8
TPM1-226ENST00000560959 USP39Q53GS9 565 aaKnown RBP20.03■□□□□ 0.8
TPM1-226ENST00000560959 OSCP1Q8WVF1 389 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 MRPS31Q92665 395 aaKnown RBP20.03■□□□□ 0.8
TPM1-226ENST00000560959 CD101Q93033 1021 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 ADAM33Q9BZ11 813 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 ECT2Q9H8V3 914 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 POLR3BQ9NW08 1133 aaPredicted RBP20.03■□□□□ 0.8
TPM1-226ENST00000560959 ODF2LQ9ULJ1 636 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 LIMCH1Q9UPQ0 1083 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 C2CD2Q9Y426 696 aa20.03■□□□□ 0.8
TPM1-226ENST00000560959 DCLK1O15075 740 aa20.02■□□□□ 0.8
TPM1-226ENST00000560959 ABCD1P33897 745 aa20.02■□□□□ 0.8
TPM1-226ENST00000560959 FOXC1Q12948 553 aa20.02■□□□□ 0.8
TPM1-226ENST00000560959 TMEM132DQ14C87 1099 aa20.02■□□□□ 0.8
TPM1-226ENST00000560959 PMS2CLQ68D20 193 aa20.02■□□□□ 0.8
TPM1-226ENST00000560959 TXNDC8Q6A555 127 aa20.02■□□□□ 0.8
TPM1-226ENST00000560959 TMEM9BQ9NQ34 198 aa20.02■□□□□ 0.8
TPM1-226ENST00000560959 UXTQ9UBK9 157 aaPredicted RBP20.02■□□□□ 0.8
TPM1-226ENST00000560959 PCDHB5Q9Y5E4 795 aa20.02■□□□□ 0.8
TPM1-226ENST00000560959 CDX4O14627 284 aaPredicted RBP20.01■□□□□ 0.79
TPM1-226ENST00000560959 PLA2G4BP0C869 781 aa20.01■□□□□ 0.79
TPM1-226ENST00000560959 NMT1P30419 496 aaKnown RBP20.01■□□□□ 0.79
TPM1-226ENST00000560959 TAF6P49848 677 aa20.01■□□□□ 0.79
TPM1-226ENST00000560959 FAM160A1Q05DH4 1040 aa20.01■□□□□ 0.79
TPM1-226ENST00000560959 ARSHQ5FYA8 562 aa20.01■□□□□ 0.79
TPM1-226ENST00000560959 RIN3Q8TB24 985 aa20.01■□□□□ 0.79
TPM1-226ENST00000560959 GATA6Q92908 595 aa20.01■□□□□ 0.79
TPM1-226ENST00000560959 ATP2A3Q93084 1043 aa20.01■□□□□ 0.79
TPM1-226ENST00000560959 FAM212AQ96EL1 285 aa20.01■□□□□ 0.79
TPM1-226ENST00000560959 PNMA5Q96PV4 448 aa20.01■□□□□ 0.79
TPM1-226ENST00000560959 MSTO1Q9BUK6 570 aa20.01■□□□□ 0.79
TPM1-226ENST00000560959 TMEM206Q9H813 350 aa20.01■□□□□ 0.79
TPM1-226ENST00000560959 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.01■□□□□ 0.79
TPM1-226ENST00000560959 EIF5BO60841 1220 aaKnown RBP20■□□□□ 0.79
TPM1-226ENST00000560959 NFICP08651 508 aa20■□□□□ 0.79
TPM1-226ENST00000560959 GBP1P32455 592 aa20■□□□□ 0.79
TPM1-226ENST00000560959 DGKEP52429 567 aa20■□□□□ 0.79
TPM1-226ENST00000560959 NR1H3Q13133 447 aa20■□□□□ 0.79
TPM1-226ENST00000560959 MTF1Q14872 753 aa20■□□□□ 0.79
TPM1-226ENST00000560959 NFE2Q16621 373 aaPredicted RBP20■□□□□ 0.79
TPM1-226ENST00000560959 WSCD1Q658N2 575 aa20■□□□□ 0.79
TPM1-226ENST00000560959 RASSF3Q86WH2 238 aa20■□□□□ 0.79
TPM1-226ENST00000560959 CCDC83Q8IWF9 413 aa20■□□□□ 0.79
TPM1-226ENST00000560959 FAM184AQ8NB25 1140 aa20■□□□□ 0.79
TPM1-226ENST00000560959 LEO1Q8WVC0 666 aaPredicted RBP20■□□□□ 0.79
TPM1-226ENST00000560959 EZH1Q92800 747 aaPredicted RBP20■□□□□ 0.79
TPM1-226ENST00000560959 TRMT2BQ96GJ1 504 aaKnown RBP20■□□□□ 0.79
TPM1-226ENST00000560959 MYRFLQ96LU7 910 aa20■□□□□ 0.79
TPM1-226ENST00000560959 PYM1Q9BRP8 204 aaKnown RBP20■□□□□ 0.79
TPM1-226ENST00000560959 DUS2Q9NX74 493 aaKnown RBP20■□□□□ 0.79
TPM1-226ENST00000560959 ABI2Q9NYB9 513 aaPredicted RBP20■□□□□ 0.79
TPM1-226ENST00000560959 EML5Q05BV3 1969 aa20■□□□□ 0.79
TPM1-226ENST00000560959 SLC26A4O43511 780 aa19.99■□□□□ 0.79
TPM1-226ENST00000560959 TCF3P15923 654 aa19.99■□□□□ 0.79
TPM1-226ENST00000560959 ZNF131P52739 623 aa19.99■□□□□ 0.79
TPM1-226ENST00000560959 ZRSR1Q15695 479 aaKnown RBP19.99■□□□□ 0.79
TPM1-226ENST00000560959 ZNF77Q15935 545 aa19.99■□□□□ 0.79
TPM1-226ENST00000560959 TSTD1Q8NFU3 115 aa19.99■□□□□ 0.79
TPM1-226ENST00000560959 ABCB6Q9NP58 842 aa19.99■□□□□ 0.79
TPM1-226ENST00000560959 EVLQ9UI08 416 aaPredicted RBP19.99■□□□□ 0.79
TPM1-226ENST00000560959 KPNA7A9QM74 516 aa19.98■□□□□ 0.79
TPM1-226ENST00000560959 USP17L7P0C7H9 530 aa19.98■□□□□ 0.79
TPM1-226ENST00000560959 RPL10AP62906 217 aaKnown RBP19.98■□□□□ 0.79
TPM1-226ENST00000560959 EML3Q32P44 896 aa19.98■□□□□ 0.79
TPM1-226ENST00000560959 SLFN12LQ6IEE8 588 aa19.98■□□□□ 0.79
TPM1-226ENST00000560959 NT5DC4Q86YG4 428 aa19.98■□□□□ 0.79
TPM1-226ENST00000560959 CNOT6LQ96LI5 555 aaKnown RBP19.98■□□□□ 0.79
TPM1-226ENST00000560959 SCNM1Q9BWG6 230 aa19.98■□□□□ 0.79
TPM1-226ENST00000560959 DPP3Q9NY33 737 aa19.98■□□□□ 0.79
TPM1-226ENST00000560959 NPHP3-ACAD11A0A0J9YXS1 232 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 SRRM3A6NNA2 597 aaPredicted RBP19.97■□□□□ 0.79
TPM1-226ENST00000560959 PRPF40AO75400 957 aaKnown RBP19.97■□□□□ 0.79
TPM1-226ENST00000560959 NOL4O94818 638 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 IFNAR2P48551 515 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 ATP2C1P98194 919 aaPredicted RBP19.97■□□□□ 0.79
TPM1-226ENST00000560959 GTF2BQ00403 316 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 TSPY1Q01534 308 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 LMAN2Q12907 356 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 USP4Q13107 963 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 ACAP1Q15027 740 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 SV2CQ496J9 727 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 TMEM119Q4V9L6 283 aa19.97■□□□□ 0.79
TPM1-226ENST00000560959 NAIF1Q69YI7 327 aaPredicted RBP19.97■□□□□ 0.79
TPM1-226ENST00000560959 SLC39A4Q6P5W5 647 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms