RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 EFEMP2O95967 443 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 MYBL1P10243 752 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 CSF2RAP15509 400 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 TYMPP19971 482 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 CASQ1P31415 396 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 NSFP46459 744 aaKnown RBP11.98□□□□□ -0.49
SNX1-212ENST00000560861 GSCP56915 257 aaPredicted RBP11.98□□□□□ -0.49
SNX1-212ENST00000560861 IKBKEQ14164 716 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 STILQ15468 1287 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 PTPN20Q4JDL3 420 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 PPP1R26Q5T8A7 1209 aaPredicted RBP11.98□□□□□ -0.49
SNX1-212ENST00000560861 PAPD7Q5XG87 772 aaKnown RBP11.98□□□□□ -0.49
SNX1-212ENST00000560861 PLEKHA7Q6IQ23 1121 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 MMS22LQ6ZRQ5 1243 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 TTC30AQ86WT1 665 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 RHOT2Q8IXI1 618 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 C12orf29Q8N999 325 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 ZNF653Q96CK0 615 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 TRIM11Q96F44 468 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 HEXIM2Q96MH2 286 aaKnown RBP11.98□□□□□ -0.49
SNX1-212ENST00000560861 PKMYT1Q99640 499 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 NAPGQ99747 312 aaPredicted RBP11.98□□□□□ -0.49
SNX1-212ENST00000560861 C11orf70Q9BRQ4 267 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 TMEM175Q9BSA9 504 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 TLR10Q9BXR5 811 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 SNX25Q9H3E2 840 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 CRTAC1Q9NQ79 661 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 MARCH5Q9NX47 278 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 HCSTQ9UBK5 93 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 CNOT8Q9UFF9 292 aaKnown RBP11.98□□□□□ -0.49
SNX1-212ENST00000560861 TSPAN16Q9UKR8 245 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 PCDHB8Q9UN66 801 aa11.98□□□□□ -0.49
SNX1-212ENST00000560861 I3L4J1 428 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 BUB1BO60566 1050 aaPredicted RBP11.97□□□□□ -0.49
SNX1-212ENST00000560861 PALMO75781 387 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 GABBR2O75899 941 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 DGKIO75912 1065 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 ATP1A1P05023 1023 aaKnown RBP11.97□□□□□ -0.49
SNX1-212ENST00000560861 PDGFRBP09619 1106 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 SETSIPP0DME0 302 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 RRM1P23921 792 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 TKTP29401 623 aaKnown RBP11.97□□□□□ -0.49
SNX1-212ENST00000560861 GABRB2P47870 512 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 LHX1P48742 406 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 RPL34P49207 117 aaKnown RBP11.97□□□□□ -0.49
SNX1-212ENST00000560861 SLC11A1P49279 550 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 CCDC142Q17RM4 750 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 GOLGA7BQ2TAP0 167 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 PAN2Q504Q3 1202 aaKnown RBP11.97□□□□□ -0.49
SNX1-212ENST00000560861 DNTTIP2Q5QJE6 756 aaKnown RBP11.97□□□□□ -0.49
SNX1-212ENST00000560861 PPP1R15BQ5SWA1 713 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 LLGL2Q6P1M3 1020 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 DSTYKQ6XUX3 929 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 PAQR9Q6ZVX9 377 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 C16orf59Q7L2K0 433 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 ZNF592Q92610 1267 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 CALR3Q96L12 384 aaKnown RBP11.97□□□□□ -0.49
SNX1-212ENST00000560861 MRPL9Q9BYD2 267 aaKnown RBP11.97□□□□□ -0.49
SNX1-212ENST00000560861 PDCL3Q9H2J4 239 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 IL23AQ9NPF7 189 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 ADAM22Q9P0K1 906 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 UVRAGQ9P2Y5 699 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 TJP2Q9UDY2 1190 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 LRFN2Q9ULH4 789 aa11.97□□□□□ -0.49
SNX1-212ENST00000560861 CTAGE9A4FU28 777 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 M0QYV0 167 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 EFCAB14O75071 495 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 ATP2C2O75185 946 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 CALB1P05937 261 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 ODC1P11926 461 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 RAG1P15918 1043 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 PTPN1P18031 435 aaKnown RBP11.96□□□□□ -0.49
SNX1-212ENST00000560861 WDR5P61964 334 aaKnown RBP11.96□□□□□ -0.49
SNX1-212ENST00000560861 DEFB103AP81534 67 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 PDCLQ13371 301 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 IFI16Q16666 785 aaKnown RBP11.96□□□□□ -0.49
SNX1-212ENST00000560861 C2CD6Q53TS8 623 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 MEI1Q5TIA1 1274 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 C11orf63Q6NUN7 778 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 FUKQ8N0W3 1084 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 LRRC43Q8N309 656 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 TMEM199Q8N511 208 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 B3GALNT2Q8NCR0 500 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 UBA3Q8TBC4 463 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 HASPINQ8TF76 798 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 STK32AQ8WU08 396 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 TOP1MTQ969P6 601 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 ZNF689Q96CS4 500 aaPredicted RBP11.96□□□□□ -0.49
SNX1-212ENST00000560861 TNIP3Q96KP6 325 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 ALS2CR12Q96Q35 445 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 CPXM1Q96SM3 734 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 HNRNPABQ99729 332 aaKnown RBP11.96□□□□□ -0.49
SNX1-212ENST00000560861 SYT15Q9BQS2 421 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 NUP85Q9BW27 656 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 SLC4A5Q9BY07 1137 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 CWH43Q9H720 699 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 PRDM5Q9NQX1 630 aaPredicted RBP11.96□□□□□ -0.49
SNX1-212ENST00000560861 FAM49BQ9NUQ9 324 aa11.96□□□□□ -0.49
SNX1-212ENST00000560861 DDX43Q9NXZ2 648 aaKnown RBP11.96□□□□□ -0.49
SNX1-212ENST00000560861 CTTNBP2NLQ9P2B4 639 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms