RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 PSMC1P62191 440 aaKnown RBP16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 PTPN21Q16825 1174 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 CBWD6Q4V339 395 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 CBWD3Q5JTY5 395 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 CBWD5Q5RIA9 395 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 KRT39Q6A163 491 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 FRMD5Q7Z6J6 570 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 TMC8Q8IU68 726 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 NPAS3Q8IXF0 933 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 ZNF512Q96ME7 567 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 LPIN3Q9BQK8 851 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 ABCB6Q9NP58 842 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 ABI2Q9NYB9 513 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 ARMCX3Q9UH62 379 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 COQ4Q9Y3A0 265 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 ASB3Q9Y575 518 aa16.33■□□□□ 0.2
SNRPA1-213ENST00000560856 BICDL2A1A5D9 508 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 ANHXE9PGG2 379 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 MICAL2O94851 1124 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 ALADP13716 330 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 CYP2F1P24903 491 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 PIK3CAP42336 1068 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 ASPAP45381 313 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 RAP1GAPP47736 663 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 ALDH1A3P47895 512 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 EPHB3P54753 998 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 PLD1Q13393 1074 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 MGAT5BQ3V5L5 792 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 CFAP221Q4G0U5 840 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 RBM43Q6ZSC3 357 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 DNAJB7Q7Z6W7 309 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 MLKLQ8NB16 471 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 OR6B3Q8NGW1 331 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 PSMG2Q969U7 264 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 BCO2Q9BYV7 579 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 SNX25Q9H3E2 840 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 DPEP3Q9H4B8 488 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 MMRN2Q9H8L6 949 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 KCNK12Q9HB15 430 aa16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 METTL14Q9HCE5 456 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 ZNF334Q9HCZ1 680 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 MRPS23Q9Y3D9 190 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 ZFP37Q9Y6Q3 630 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-213ENST00000560856 CEBPBP17676 345 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 PTPN1P18031 435 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 GPR15P49685 360 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 MXI1P50539 228 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 MARSP56192 900 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 NOP14P78316 857 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 ZXDAP98168 799 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 HTR4Q13639 388 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 IQCEQ6IPM2 695 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 SCARA5Q6ZMJ2 495 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 ELMOD1Q8N336 334 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 FBXL13Q8NEE6 735 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 MYCBPAPQ8TBZ2 947 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 RSAD2Q8WXG1 361 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 ING5Q8WYH8 240 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 EDAQ92838 391 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 MYLPFQ96A32 169 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 FUBP3Q96I24 572 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 SEPT5Q99719 369 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 SRRTQ9BXP5 876 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 SMOC2Q9H3U7 446 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 IL21Q9HBE4 155 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.31■□□□□ 0.21e-15■■■■■ 72.7
SNRPA1-213ENST00000560856 RWDD2AQ9UIY3 292 aa16.31■□□□□ 0.2
SNRPA1-213ENST00000560856 STX10O60499 249 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 HMGA1P17096 107 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 MAGEA11P43364 429 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 NLRP12P59046 1061 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 DPCR1Q3MIW9 517 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 DCAF17Q5H9S7 520 aaPredicted RBP16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 TCERG1LQ5VWI1 586 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 GAREM2Q75VX8 874 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 IRF2BP1Q8IU81 584 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 TRIM59Q8IWR1 403 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 LEMD2Q8NC56 503 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 SHKBP1Q8TBC3 707 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 GIPC2Q8TF65 315 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 PCED1BQ96HM7 432 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 RPP25Q9BUL9 199 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 ASAH2Q9NR71 780 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 RAB20Q9NX57 234 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 IGSF9Q9P2J2 1179 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 SORCS3Q9UPU3 1222 aa16.3■□□□□ 0.2
SNRPA1-213ENST00000560856 A8MXQ7 604 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 GOLGA6L22H0YM25 854 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 ZNF197O14709 1029 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 PMM2O15305 246 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 MYL4P12829 197 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 P4HA1P13674 534 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 GJA1P17302 382 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 INCA1Q0VD86 236 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 MAPRE1Q15691 268 aaKnown RBP16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 DDR2Q16832 855 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 MDH1BQ5I0G3 518 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 CYP4A22Q5TCH4 519 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 SDHAF4Q5VUM1 108 aa16.29■□□□□ 0.2
SNRPA1-213ENST00000560856 PARM1Q6UWI2 310 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms