RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 KLHL13Q9P2N7 655 aa3.77□□□□□ -1.81
SPG11-222ENST00000560435 ADAMTS5Q9UNA0 930 aa3.77□□□□□ -1.81
SPG11-222ENST00000560435 FAM90A8PA6NJQ4 464 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 ZNF785A8K8V0 405 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 USP1O94782 785 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 PRKD3O94806 890 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 ALPLP05186 524 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 IL6RP08887 468 aaPredicted RBP3.76□□□□□ -1.81
SPG11-222ENST00000560435 FAM90A13PP0C7W8 464 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 FAM90A24PP0C7X0 464 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 ENGP17813 658 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 CHRM3P20309 590 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 IL1R2P27930 398 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 LIPAP38571 399 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 CLCN2P51788 898 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 NANOS2P60321 138 aaKnown RBP3.76□□□□□ -1.81
SPG11-222ENST00000560435 ERV3-1Q14264 604 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 RBMS2Q15434 407 aaKnown RBP3.76□□□□□ -1.81
SPG11-222ENST00000560435 CERKLQ49MI3 558 aaPredicted RBP3.76□□□□□ -1.81
SPG11-222ENST00000560435 KRT78Q8N1N4 520 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 UBR7Q8N806 425 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 DAZAP1Q96EP5 407 aaKnown RBP3.76□□□□□ -1.81
SPG11-222ENST00000560435 TINAGL1Q9GZM7 467 aaPredicted RBP3.76□□□□□ -1.81
SPG11-222ENST00000560435 BRD9Q9H8M2 597 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 GPR35Q9HC97 309 aa3.76□□□□□ -1.81
SPG11-222ENST00000560435 MRPS18AQ9NVS2 196 aaKnown RBP3.76□□□□□ -1.81
SPG11-222ENST00000560435 SIDT1Q9NXL6 827 aaKnown RBP3.76□□□□□ -1.81
SPG11-222ENST00000560435 SCAF8Q9UPN6 1271 aaKnown RBP3.76□□□□□ -1.81
SPG11-222ENST00000560435 WASHC2AQ641Q2 1341 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 POC1B-GALNT4F8VUJ3 575 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 FCHO1O14526 889 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 GNAI3P08754 354 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 CHRM5P08912 532 aaPredicted RBP3.75□□□□□ -1.81
SPG11-222ENST00000560435 NPSP0C0P6 89 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 CYP2C19P33261 490 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 SOX5P35711 763 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 TOB1P50616 345 aaPredicted RBP3.75□□□□□ -1.81
SPG11-222ENST00000560435 ZNF135P52742 658 aaPredicted RBP3.75□□□□□ -1.81
SPG11-222ENST00000560435 ERVK-21P61565 698 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 PSMC1P62191 440 aaKnown RBP3.75□□□□□ -1.81
SPG11-222ENST00000560435 GNAI1P63096 354 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 SEMA3AQ14563 771 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 TAF7LQ5H9L4 462 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 TREML2Q5T2D2 321 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 C9orf47Q6ZRZ4 202 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 JAZF1Q86VZ6 243 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 GALNT4Q8N4A0 578 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 AFAP1L2Q8N4X5 818 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 RBMXL3Q8N7X1 1067 aaKnown RBP3.75□□□□□ -1.81
SPG11-222ENST00000560435 RP9Q8TA86 221 aaKnown RBP3.75□□□□□ -1.81
SPG11-222ENST00000560435 UBXN4Q92575 508 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 CLPTM1LQ96KA5 538 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 PPP1R10Q96QC0 940 aaKnown RBP3.75□□□□□ -1.81
SPG11-222ENST00000560435 DMRTA2Q96SC8 542 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 SIK2Q9H0K1 926 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 CAAP1Q9H8G2 361 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 CFAP97Q9P2B7 532 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 RAD54BQ9Y620 910 aa3.75□□□□□ -1.81
SPG11-222ENST00000560435 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 CD8B2A6NJW9 211 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 F2RL2O00254 374 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 KRT86O43790 486 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 GJB1P08034 283 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 CYP2A6P11509 494 aaPredicted RBP3.74□□□□□ -1.81
SPG11-222ENST00000560435 PRF1P14222 555 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 MT3P25713 68 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 GCLCP48506 637 aaPredicted RBP3.74□□□□□ -1.81
SPG11-222ENST00000560435 SLC16A1P53985 500 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 KRT81Q14533 505 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 TRIM71Q2Q1W2 868 aaKnown RBP3.74□□□□□ -1.81
SPG11-222ENST00000560435 LEXMQ3ZCV2 418 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 C10orf25Q5T742 122 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 FCRL6Q6DN72 434 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 SFRP4Q6FHJ7 346 aaPredicted RBP3.74□□□□□ -1.81
SPG11-222ENST00000560435 PPP4R3AQ6IN85 833 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 PPP1R32Q7Z5V6 425 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 AMOTL1Q8IY63 956 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 LRRC71Q8N4P6 559 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 MAN1C1Q9NR34 630 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 GNL3LQ9NVN8 582 aaKnown RBP3.74□□□□□ -1.81
SPG11-222ENST00000560435 TUBD1Q9UJT1 453 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 IPPQ9Y573 584 aa3.74□□□□□ -1.81
SPG11-222ENST00000560435 TRIM75PA6NK02 468 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 NT5C1B-RDH14C9J2C7 533 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 K7ESF4 209 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 ENPP3O14638 875 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 NDUFS2O75306 463 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 VPS4BO75351 444 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 TJP3O95049 919 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 HTR6P50406 440 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 HYAL1Q12794 435 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 IL10RAQ13651 578 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 KRTAP27-1Q3LI81 207 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 MEX3CQ5U5Q3 659 aaKnown RBP3.73□□□□□ -1.81
SPG11-222ENST00000560435 ICE2Q659A1 982 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 KIRREL2Q6UWL6 708 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 ZNF813Q6ZN06 617 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 Q6ZTC4 211 aa3.73□□□□□ -1.81
SPG11-222ENST00000560435 PARS2Q7L3T8 475 aaKnown RBP3.73□□□□□ -1.81
SPG11-222ENST00000560435 CUL5Q93034 780 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms