RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 C1orf127Q8N9H9 656 aa18.73■□□□□ 0.59
CRTC3-208ENST00000560098 ZSWIM2Q8NEG5 633 aa18.73■□□□□ 0.59
CRTC3-208ENST00000560098 CACTINQ8WUQ7 758 aaKnown RBP18.73■□□□□ 0.59
CRTC3-208ENST00000560098 FAM83CQ9BQN1 747 aa18.73■□□□□ 0.59
CRTC3-208ENST00000560098 PI4K2AQ9BTU6 479 aa18.73■□□□□ 0.59
CRTC3-208ENST00000560098 GKN1Q9NS71 199 aa18.73■□□□□ 0.59
CRTC3-208ENST00000560098 C2orf42Q9NWW7 574 aa18.73■□□□□ 0.59
CRTC3-208ENST00000560098 HUS1O60921 280 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 LRP3O75074 770 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 CSH1P0DML2 217 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 CSH2P0DML3 217 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 IDEP14735 1019 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 GPR15P49685 360 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 CASP5P51878 434 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 CEBPZQ03701 1054 aaKnown RBP18.72■□□□□ 0.59
CRTC3-208ENST00000560098 BFSP1Q12934 665 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 RESTQ13127 1097 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 SRSF5Q13243 272 aaKnown RBP18.72■□□□□ 0.59
CRTC3-208ENST00000560098 ALCAMQ13740 583 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 FAM173BQ6P4H8 233 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 CCDC73Q6ZRK6 1079 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 LRRC52Q8N7C0 313 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 LEO1Q8WVC0 666 aaPredicted RBP18.72■□□□□ 0.59
CRTC3-208ENST00000560098 USP13Q92995 863 aaPredicted RBP18.72■□□□□ 0.59
CRTC3-208ENST00000560098 ACBD6Q9BR61 282 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 DDX43Q9NXZ2 648 aaKnown RBP18.72■□□□□ 0.59
CRTC3-208ENST00000560098 L1RE1Q9UN81 338 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 CCL26Q9Y258 94 aa18.72■□□□□ 0.59
CRTC3-208ENST00000560098 SOBPA7XYQ1 873 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 HOXA6P31267 233 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 MYL7Q01449 175 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 RUNX3Q13761 415 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 TXNDC8Q6A555 127 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 TMEM86AQ8N2M4 240 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 CSGALNACT2Q8N6G5 542 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 CXorf38Q8TB03 319 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 MRPS31Q92665 395 aaKnown RBP18.71■□□□□ 0.59
CRTC3-208ENST00000560098 RTKNQ9BST9 563 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 KIF9Q9HAQ2 790 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 ABCB6Q9NP58 842 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 HPS4Q9NQG7 708 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 TDP1Q9NUW8 608 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 ITGA11Q9UKX5 1188 aa18.71■□□□□ 0.59
CRTC3-208ENST00000560098 MAGED2Q9UNF1 606 aaPredicted RBP18.71■□□□□ 0.59
CRTC3-208ENST00000560098 NCOR2Q9Y618 2525 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 FRMD3A2A2Y4 597 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 GOLGA8IPA6NC78 632 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 GOLGA8JA6NMD2 632 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 EXTL3O43909 919 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 SYT1P21579 422 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 STAT6P42226 847 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 RPL10AP62906 217 aaKnown RBP18.7■□□□□ 0.58
CRTC3-208ENST00000560098 INTS6LQ5JSJ4 861 aaKnown RBP18.7■□□□□ 0.58
CRTC3-208ENST00000560098 SDHAF4Q5VUM1 108 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 TRIM68Q6AZZ1 485 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.7■□□□□ 0.58
CRTC3-208ENST00000560098 MON1AQ86VX9 555 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 STKLD1Q8NE28 680 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 CBWD1Q9BRT8 395 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 FGFBP2Q9BYJ0 223 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 PANK2Q9BZ23 570 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 EBF3Q9H4W6 596 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 TMEM206Q9H813 350 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 PANK4Q9NVE7 773 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 GDAP2Q9NXN4 497 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.7■□□□□ 0.58
CRTC3-208ENST00000560098 TCHHQ07283 1943 aa18.7■□□□□ 0.58
CRTC3-208ENST00000560098 KRT19P08727 400 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 ACAT1P24752 427 aaKnown RBP18.69■□□□□ 0.58
CRTC3-208ENST00000560098 CYP2F1P24903 491 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 RBP5P82980 135 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 GRSF1Q12849 480 aaKnown RBP eCLIP18.69■□□□□ 0.58
CRTC3-208ENST00000560098 DDR2Q16832 855 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 TMEM196Q5HYL7 178 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 SCARA3Q6AZY7 606 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 WDR5BQ86VZ2 330 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 TOP6BLQ8N6T0 577 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 SPATA18Q8TC71 538 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 NOC3LQ8WTT2 800 aaKnown RBP18.69■□□□□ 0.58
CRTC3-208ENST00000560098 FAM84AQ96KN4 292 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 PKMYT1Q99640 499 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 PCIF1Q9H4Z3 704 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 PDE11AQ9HCR9 933 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 SEMA4GQ9NTN9 838 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 UXTQ9UBK9 157 aaPredicted RBP18.69■□□□□ 0.58
CRTC3-208ENST00000560098 GTF3C4Q9UKN8 822 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 SNX9Q9Y5X1 595 aa18.69■□□□□ 0.58
CRTC3-208ENST00000560098 MORC2Q9Y6X9 1032 aaPredicted RBP18.69■□□□□ 0.58
CRTC3-208ENST00000560098 A0A087X0B3 334 aa18.68■□□□□ 0.58
CRTC3-208ENST00000560098 DCDC2BA2VCK2 349 aa18.68■□□□□ 0.58
CRTC3-208ENST00000560098 OTOL1A6NHN0 477 aaPredicted RBP18.68■□□□□ 0.58
CRTC3-208ENST00000560098 TRDMT1O14717 391 aaKnown RBP18.68■□□□□ 0.58
CRTC3-208ENST00000560098 NOL4O94818 638 aa18.68■□□□□ 0.58
CRTC3-208ENST00000560098 TMEM191BP0C7N4 346 aa18.68■□□□□ 0.58
CRTC3-208ENST00000560098 HOXC13P31276 330 aa18.68■□□□□ 0.58
CRTC3-208ENST00000560098 AMPD2Q01433 879 aa18.68■□□□□ 0.58
CRTC3-208ENST00000560098 ZNF268Q14587 947 aaPredicted RBP18.68■□□□□ 0.58
CRTC3-208ENST00000560098 SLC39A14Q15043 492 aa18.68■□□□□ 0.58
CRTC3-208ENST00000560098 CSRP2Q16527 193 aa18.68■□□□□ 0.58
CRTC3-208ENST00000560098 CC2D1AQ6P1N0 951 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms