RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 POSTNQ15063 836 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 CSRP2Q16527 193 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 PRR23CQ6ZRP0 262 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.12□□□□□ -0.15
TPM1-220ENST00000559556 WDR5BQ86VZ2 330 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 KRI1Q8N9T8 703 aaKnown RBP14.12□□□□□ -0.15
TPM1-220ENST00000559556 GIPC2Q8TF65 315 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 LEO1Q8WVC0 666 aaPredicted RBP14.12□□□□□ -0.15
TPM1-220ENST00000559556 POMGNT1Q8WZA1 660 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 FAM83CQ9BQN1 747 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 KIF9Q9HAQ2 790 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 SEMA4GQ9NTN9 838 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 THG1LQ9NWX6 298 aaKnown RBP14.12□□□□□ -0.15
TPM1-220ENST00000559556 PCDHB5Q9Y5E4 795 aa14.12□□□□□ -0.15
TPM1-220ENST00000559556 TP53BP1Q12888 1972 aaPredicted RBP14.11□□□□□ -0.15
TPM1-220ENST00000559556 DSPP15924 2871 aaKnown RBP14.11□□□□□ -0.15
TPM1-220ENST00000559556 DCDC2BA2VCK2 349 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 SOBPA7XYQ1 873 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 FOXD2O60548 495 aaPredicted RBP14.11□□□□□ -0.15
TPM1-220ENST00000559556 F11P03951 625 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 PNPLA4P41247 253 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 CDR1P51861 262 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 PTPAQ15257 358 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 TAF12Q16514 161 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 TMEM196Q5HYL7 178 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 HEATR6Q6AI08 1181 aaKnown RBP14.11□□□□□ -0.15
TPM1-220ENST00000559556 USP49Q70CQ1 688 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 DYMQ7RTS9 669 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 BRSK2Q8IWQ3 736 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 DCP1BQ8IZD4 617 aaKnown RBP14.11□□□□□ -0.15
TPM1-220ENST00000559556 FAM160A2Q8N612 972 aaPredicted RBP14.11□□□□□ -0.15
TPM1-220ENST00000559556 DNAJC19Q96DA6 116 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 CHFRQ96EP1 664 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 EPSTI1Q96J88 318 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 CNTNAP3BQ96NU0 1288 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 CNTNAP3Q9BZ76 1288 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 SMG9Q9H0W8 520 aaKnown RBP14.11□□□□□ -0.15
TPM1-220ENST00000559556 HPS4Q9NQG7 708 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 GKN1Q9NS71 199 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 TMLHEQ9NVH6 421 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 CCL26Q9Y258 94 aa14.11□□□□□ -0.15
TPM1-220ENST00000559556 ANKRD11Q6UB99 2663 aaPredicted RBP14.11□□□□□ -0.15
TPM1-220ENST00000559556 CCDC163A0A0D9SF12 145 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 CSH1P0DML2 217 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 CSH2P0DML3 217 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 GAP43P17677 238 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 HOXC13P31276 330 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 AVPR1AP37288 418 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 WNT7BP56706 349 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 TSPY1Q01534 308 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 KCNA1Q09470 495 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 NFE2Q16621 373 aaPredicted RBP14.1□□□□□ -0.15
TPM1-220ENST00000559556 L1TD1Q5T7N2 865 aaKnown RBP14.1□□□□□ -0.15
TPM1-220ENST00000559556 PKN3Q6P5Z2 889 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 MAB21L3Q8N8X9 362 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 USP13Q92995 863 aaPredicted RBP14.1□□□□□ -0.15
TPM1-220ENST00000559556 TRMT2BQ96GJ1 504 aaKnown RBP14.1□□□□□ -0.15
TPM1-220ENST00000559556 MRPL44Q9H9J2 332 aaKnown RBP14.1□□□□□ -0.15
TPM1-220ENST00000559556 ABCB6Q9NP58 842 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 OLFML3Q9NRN5 406 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 TDP1Q9NUW8 608 aa14.1□□□□□ -0.15
TPM1-220ENST00000559556 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.09□□□□□ -0.15
TPM1-220ENST00000559556 OTOL1A6NHN0 477 aaPredicted RBP14.09□□□□□ -0.15
TPM1-220ENST00000559556 MYMKA6NI61 221 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 TRDMT1O14717 391 aaKnown RBP14.09□□□□□ -0.15
TPM1-220ENST00000559556 EXTL3O43909 919 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 TADA3O75528 432 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 ITGB3P05106 788 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 ADRB1P08588 477 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 POLR2BP30876 1174 aaKnown RBP14.09□□□□□ -0.15
TPM1-220ENST00000559556 BFSP1Q12934 665 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 RUNX3Q13761 415 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 ZNF268Q14587 947 aaPredicted RBP14.09□□□□□ -0.15
TPM1-220ENST00000559556 FSTL4Q6MZW2 842 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 CEP68Q76N32 757 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 TMEM86AQ8N2M4 240 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 PDCL2Q8N4E4 241 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 LRRC52Q8N7C0 313 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 C1orf127Q8N9H9 656 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 ZSWIM2Q8NEG5 633 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 CXorf38Q8TB03 319 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 RIN3Q8TB24 985 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 SPATA18Q8TC71 538 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 GAB3Q8WWW8 586 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 PKMYT1Q99640 499 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 ACBD6Q9BR61 282 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 FAM213AQ9BRX8 229 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 EBF3Q9H4W6 596 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 UXTQ9UBK9 157 aaPredicted RBP14.09□□□□□ -0.15
TPM1-220ENST00000559556 FBXO2Q9UK22 296 aaPredicted RBP14.09□□□□□ -0.15
TPM1-220ENST00000559556 L1RE1Q9UN81 338 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 EXOC7Q9UPT5 735 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 ZFYVE26Q68DK2 2539 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 DMXL2Q8TDJ6 3036 aa14.09□□□□□ -0.15
TPM1-220ENST00000559556 ZFHX4Q86UP3 3567 aa14.08□□□□□ -0.16
TPM1-220ENST00000559556 PRPF40AO75400 957 aaKnown RBP14.08□□□□□ -0.16
TPM1-220ENST00000559556 NOL4O94818 638 aa14.08□□□□□ -0.16
TPM1-220ENST00000559556 LDHAP00338 332 aaKnown RBP14.08□□□□□ -0.16
TPM1-220ENST00000559556 GARTP22102 1010 aa14.08□□□□□ -0.16
TPM1-220ENST00000559556 GPR15P49685 360 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms