RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 CNKSR3Q6P9H4 555 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 LIMS2Q7Z4I7 341 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 TSC22D3Q99576 134 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 RSAD1Q9HA92 442 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 CYP3A43Q9HB55 503 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 UMODL1Q5DID0 1318 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 PCNTO95613 3336 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 MYL6P60660 151 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 PDCLQ13371 301 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 ASTE1Q2TB18 679 aaPredicted RBP17.34■□□□□ 0.37
PBX1-215ENST00000559240 SYT11Q9BT88 431 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 TDRD15B5MCY1 1934 aaKnown RBP17.34■□□□□ 0.37
PBX1-215ENST00000559240 ENPP3O14638 875 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 ACO1P21399 889 aaKnown RBP17.34■□□□□ 0.37
PBX1-215ENST00000559240 YWHAEP62258 255 aaKnown RBP17.34■□□□□ 0.37
PBX1-215ENST00000559240 ASIC2Q16515 512 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 GJB7Q6PEY0 223 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 UROC1Q96N76 676 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 IQCGQ9H095 443 aaKnown RBP17.34■□□□□ 0.37
PBX1-215ENST00000559240 HPCAL4Q9UM19 191 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 NUB1Q9Y5A7 615 aa17.34■□□□□ 0.37
PBX1-215ENST00000559240 ARL5CA6NH57 179 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 RBAK-RBAKDNI3L0D1 243 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 SMIM24O75264 130 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 LRRN2O75325 713 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 ITGB3P05106 788 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 RPL9P32969 192 aaKnown RBP17.33■□□□□ 0.36
PBX1-215ENST00000559240 AARSP49588 968 aaKnown RBP eCLIP17.33■□□□□ 0.36
PBX1-215ENST00000559240 ZNF699Q32M78 642 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 C9orf57Q5W0N0 161 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 DBF4BQ8NFT6 615 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 TRIM58Q8NG06 486 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 VWCEQ96DN2 955 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 ALS2CR12Q96Q35 445 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 EFCAB14O75071 495 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 P4HA1P13674 534 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 SLC8A1P32418 973 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 ROR2Q01974 943 aaKnown RBP17.33■□□□□ 0.36
PBX1-215ENST00000559240 ZNF560Q96MR9 790 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 OSBPL9Q96SU4 736 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 DESI2Q9BSY9 194 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 GDAP2Q9NXN4 497 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 ARHGAP20Q9P2F6 1191 aa17.33■□□□□ 0.36
PBX1-215ENST00000559240 HOXA2O43364 376 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 ASPAP45381 313 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 ZNF132P52740 706 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 RAPGEF1Q13905 1077 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 PPM1KQ8N3J5 372 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 GORASP1Q9BQQ3 440 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 CXCL16Q9H2A7 254 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 PIDD1Q9HB75 910 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 RNF19AQ9NV58 838 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 ATP2C2O75185 946 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 THP07101 528 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 MFSD5Q6N075 450 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 ZNF662Q6ZS27 426 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 RPS6KC1Q96S38 1066 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 ARPC5LQ9BPX5 153 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 FAM167BQ9BTA0 163 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 KANSL3Q9P2N6 904 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 TUBGCP4Q9UGJ1 667 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 NENFQ9UMX5 172 aa17.32■□□□□ 0.36
PBX1-215ENST00000559240 ZNF24P17028 368 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 POLR2BP30876 1174 aaKnown RBP17.31■□□□□ 0.36
PBX1-215ENST00000559240 CYP2C18P33260 490 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 ZNF667Q5HYK9 610 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 SPATA18Q8TC71 538 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 DDX27Q96GQ7 796 aaKnown RBP17.31■□□□□ 0.36
PBX1-215ENST00000559240 PI4K2AQ9BTU6 479 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 CEP350Q5VT06 3117 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 TRIM43BA6NCK2 446 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 FOXN3O00409 490 aaPredicted RBP17.31■□□□□ 0.36
PBX1-215ENST00000559240 MLH1P40692 756 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 BPIFB4P59827 614 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 TOGARAM2Q6ZUX3 1019 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 NPAS4Q8IUM7 802 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 GSPT2Q8IYD1 628 aaKnown RBP17.31■□□□□ 0.36
PBX1-215ENST00000559240 TRIM43Q96BQ3 446 aaPredicted RBP17.31■□□□□ 0.36
PBX1-215ENST00000559240 HPDLQ96IR7 371 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 APOL6Q9BWW8 343 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 NHEJ1Q9H9Q4 299 aaPredicted RBP17.31■□□□□ 0.36
PBX1-215ENST00000559240 SUN2Q9UH99 717 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 BAIAP2L1Q9UHR4 511 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 AGAP1Q9UPQ3 857 aa17.31■□□□□ 0.36
PBX1-215ENST00000559240 EVI5O60447 810 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 CYLC1P35663 651 aaPredicted RBP17.3■□□□□ 0.36
PBX1-215ENST00000559240 INCA1Q0VD86 236 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 RAD9BQ6WBX8 426 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 ZNF677Q86XU0 584 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 NOA1Q8NC60 698 aaKnown RBP17.3■□□□□ 0.36
PBX1-215ENST00000559240 OLIG1Q8TAK6 271 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 FAM84AQ96KN4 292 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 GAD1Q99259 594 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 TTC3P53804 2025 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 COL4A6Q14031 1691 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 ABHD14A-ACY1A0A1B0GW23 586 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 EN2P19622 333 aaPredicted RBP17.3■□□□□ 0.36
PBX1-215ENST00000559240 SPRED3Q2MJR0 410 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 TCTN1Q2MV58 587 aa17.3■□□□□ 0.36
PBX1-215ENST00000559240 DPH6Q7L8W6 267 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms