RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 HPDLQ96IR7 371 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 FAM193BQ96PV7 902 aaPredicted RBP16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 EHD2Q9NZN4 543 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 I3L4J1 428 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 B3GAT3O94766 335 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 ALDH2P05091 517 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 SGSM1Q2NKQ1 1148 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 GLE1Q53GS7 698 aaKnown RBP16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 KAT5Q92993 513 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 MARCH5Q9NX47 278 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 SMARCAL1Q9NZC9 954 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 POLIQ9UNA4 740 aa16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 YBX2Q9Y2T7 364 aaKnown RBP16.88■□□□□ 0.29
CDC42BPB-204ENST00000559043 GBF1Q92538 1859 aa16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 ZMYND10O75800 440 aa16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 MYBL2P10244 700 aa16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 BRCC3P46736 316 aa16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 TIGD5Q53EQ6 642 aa16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 DCLRE1AQ6PJP8 1040 aa16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 ZNF771Q7L3S4 317 aaPredicted RBP16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 TDHQ8IZJ6 230 aa16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 LRRC52Q8N7C0 313 aa16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 HDAC7Q8WUI4 952 aa16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 DDX27Q96GQ7 796 aaKnown RBP16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 MS4A14Q96JA4 679 aa16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 ACBD3Q9H3P7 528 aa16.87■□□□□ 0.29
CDC42BPB-204ENST00000559043 H2AFZP0C0S5 128 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 CCDC172P0C7W6 258 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 TNFRSF8P28908 595 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 AARSP49588 968 aaKnown RBP eCLIP16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 WDR72Q3MJ13 1102 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 KCNT2Q6UVM3 1135 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 H2AFVQ71UI9 128 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 SLFN11Q7Z7L1 901 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 LNX1Q8TBB1 728 aaPredicted RBP16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 AENQ8WTP8 325 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 RSPH1Q8WYR4 309 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 CLP1Q92989 425 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 RBM12Q9NTZ6 932 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 DMGDHQ9UI17 866 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 FAN1Q9Y2M0 1017 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 LINC01553A4QN01 128 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 KPNA7A9QM74 516 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 NOP14P78316 857 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 ZNF699Q32M78 642 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 FIBCD1Q8N539 461 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 COLGALT1Q8NBJ5 622 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 TPCN2Q8NHX9 752 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 UROC1Q96N76 676 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 TMEM175Q9BSA9 504 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 VN1R3Q9BXE9 311 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 PBX4Q9BYU1 374 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 GPR62Q9BZJ7 368 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 SDCBP2Q9H190 292 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 VRTNQ9H8Y1 702 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 MED4Q9NPJ6 270 aa16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 NXF1Q9UBU9 619 aaKnown RBP16.86■□□□□ 0.29
CDC42BPB-204ENST00000559043 KIAA1671Q9BY89 1806 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 STAU1O95793 577 aaKnown RBP16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 EFEMP2O95967 443 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 CA3P07451 260 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 ATICP31939 592 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 ALDH7A1P49419 539 aaKnown RBP16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 CDH8P55286 799 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 CETN1Q12798 172 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 RPS6KA1Q15418 735 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 TAS1R1Q7RTX1 841 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 KREMEN1Q96MU8 473 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 SELENOOQ9BVL4 669 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 STIM2Q9P246 746 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 HPCAL4Q9UM19 191 aa16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 PACSIN2Q9UNF0 486 aaPredicted RBP16.85■□□□□ 0.29
CDC42BPB-204ENST00000559043 ASPAP45381 313 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 TAF6P49848 677 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 SOWAHAQ2M3V2 549 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 SPOUT1Q5T280 376 aaKnown RBP16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 FAM71BQ8TC56 605 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 UBE2TQ9NPD8 197 aaPredicted RBP16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 GDAP2Q9NXN4 497 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 SNX9Q9Y5X1 595 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 TMEM189-UBE2V1I3L0A0 370 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 WEE2P0C1S8 567 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 NOP2P46087 812 aaKnown RBP16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 GALCP54803 685 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 C8orf74Q6P047 294 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 LIMS2Q7Z4I7 341 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 DNAAF5Q86Y56 855 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 SLC39A11Q8N1S5 342 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 TAF4BQ92750 862 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 PBKQ96KB5 322 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 SENP8Q96LD8 212 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 C17orf80Q9BSJ5 609 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 SMYD3Q9H7B4 428 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 TMEM59LQ9UK28 342 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 ADAM28Q9UKQ2 775 aa16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 COLQQ9Y215 455 aaPredicted RBP16.84■□□□□ 0.29
CDC42BPB-204ENST00000559043 STXBP5LQ9Y2K9 1186 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms