RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CCNI2Q6ZMN8 369 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-207ENST00000558763 TMEM35BQ8NCS4 154 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 TRIM43Q96BQ3 446 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-207ENST00000558763 TRIM6Q9C030 488 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-207ENST00000558763 TJP2Q9UDY2 1190 aa13.73□□□□□ -0.21
SMAD3-207ENST00000558763 BARX2Q9UMQ3 279 aaPredicted RBP13.73□□□□□ -0.21
SMAD3-207ENST00000558763 CCDC66A2RUB6 948 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 O00370 1275 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 PIRO00625 290 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 ATP8B1O43520 1251 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 MGEA5O60502 916 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 PROSCO94903 275 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 PYGMP11217 842 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 YARSP54577 528 aaKnown RBP13.72□□□□□ -0.21
SMAD3-207ENST00000558763 RPL7AP62424 266 aaKnown RBP13.72□□□□□ -0.21
SMAD3-207ENST00000558763 DEFB128Q7Z7B8 93 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 C7orf61Q8IZ16 206 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 LRRC52Q8N7C0 313 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 UBL4BQ8N7F7 174 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 AENQ8WTP8 325 aaKnown RBP13.72□□□□□ -0.21
SMAD3-207ENST00000558763 TMEM176AQ96HP8 235 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 DDX47Q9H0S4 455 aaKnown RBP13.72□□□□□ -0.21
SMAD3-207ENST00000558763 GDF3Q9NR23 364 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 KLK14Q9P0G3 267 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.72□□□□□ -0.21
SMAD3-207ENST00000558763 SQORQ9Y6N5 450 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 MEIS3P2A8K0S8 358 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 CCDC188H7C350 402 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 PTGESO14684 152 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 SPOPO43791 374 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 ERLIN1O75477 346 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 P4HA1P13674 534 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 CD19P15391 556 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 RAG1P15918 1043 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 PLA2G4AP47712 749 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 NDST1P52848 882 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 TNNC1P63316 161 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 OGDHQ02218 1023 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 LIN9Q5TKA1 542 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 LIMS2Q7Z4I7 341 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 MRPL45Q9BRJ2 306 aaKnown RBP13.72□□□□□ -0.21
SMAD3-207ENST00000558763 UBXN6Q9BZV1 441 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 UBQLN1Q9UMX0 589 aaKnown RBP13.72□□□□□ -0.21
SMAD3-207ENST00000558763 SCINQ9Y6U3 715 aa13.72□□□□□ -0.21
SMAD3-207ENST00000558763 TMEM191CA6NGB0 347 aa13.71□□□□□ -0.21
SMAD3-207ENST00000558763 KRIT1O00522 736 aa13.71□□□□□ -0.21
SMAD3-207ENST00000558763 SPTLC1O15269 473 aa13.71□□□□□ -0.21
SMAD3-207ENST00000558763 SART1O43290 800 aaKnown RBP13.71□□□□□ -0.21
SMAD3-207ENST00000558763 HEXIM1O94992 359 aaKnown RBP13.71□□□□□ -0.21
SMAD3-207ENST00000558763 CALB1P05937 261 aa13.71□□□□□ -0.21
SMAD3-207ENST00000558763 GSCP56915 257 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-207ENST00000558763 SIX1Q15475 284 aaPredicted RBP13.71□□□□□ -0.21
SMAD3-207ENST00000558763 KLHL7Q8IXQ5 586 aa13.71□□□□□ -0.21
SMAD3-207ENST00000558763 DBF4BQ8NFT6 615 aa13.71□□□□□ -0.21
SMAD3-207ENST00000558763 BEST2Q8NFU1 509 aa13.71□□□□□ -0.21
SMAD3-207ENST00000558763 TET1Q8NFU7 2136 aa13.71□□□□□ -0.21
SMAD3-207ENST00000558763 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
SMAD3-207ENST00000558763 CPXM1Q96SM3 734 aa13.71□□□□□ -0.21
SMAD3-207ENST00000558763 PARVAQ9NVD7 372 aa13.71□□□□□ -0.21
SMAD3-207ENST00000558763 TCRBV7S2A1N4TA0A589 114 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 SPDYE4A6NLX3 237 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 MYO1FO00160 1098 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 KIAA0355O15063 1070 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 MICAL2O94851 1124 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 TIMP1P01033 207 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 MCM3P25205 808 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 MAN1A1P33908 653 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 SLC1A1P43005 524 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 GPD2P43304 727 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 TAS2R40P59535 323 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 TRADDQ15628 312 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 CYP4A22Q5TCH4 519 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 C3orf20Q8ND61 904 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 GSTCDQ8NEC7 633 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 FEZF2Q8TBJ5 459 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 ADAM2Q99965 735 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 HERPUD2Q9BSE4 406 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 PLEKHA4Q9H4M7 779 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 GOLGA2P5Q9HBQ8 144 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 MRPL47Q9HD33 250 aaKnown RBP13.71□□□□□ -0.22
SMAD3-207ENST00000558763 CHST12Q9NRB3 414 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 OGFRQ9NZT2 677 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 PRKAG2Q9UGJ0 569 aa13.71□□□□□ -0.22
SMAD3-207ENST00000558763 ESYT3A0FGR9 886 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 PFKMP08237 780 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 VDRP11473 427 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 MYO1EQ12965 1108 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 CNGA2Q16280 664 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 KCTD19Q17RG1 926 aaPredicted RBP13.7□□□□□ -0.22
SMAD3-207ENST00000558763 SOWAHAQ2M3V2 549 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 TCTN1Q2MV58 587 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 PLEKHG4Q58EX7 1191 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 CCDC70Q6NSX1 233 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 PRELID2Q8N945 189 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 KBTBD7Q8WVZ9 684 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 PPP1R10Q96QC0 940 aaKnown RBP13.7□□□□□ -0.22
SMAD3-207ENST00000558763 TSPAN18Q96SJ8 248 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 FAM105AQ9NUU6 356 aa13.7□□□□□ -0.22
SMAD3-207ENST00000558763 SNX9Q9Y5X1 595 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms