RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 ZNF618Q5T7W0 954 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 JOSD2Q8TAC2 188 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 FAM53CQ9NYF3 392 aa11.43□□□□□ -0.58
CSPG4P5-201ENST00000558731 PLXNB2O15031 1838 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 MEFVO15553 781 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 HUS1O60921 280 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 CYP1A1P04798 512 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 MYBL1P10243 752 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 YY1P25490 414 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 CAPN12Q6ZSI9 719 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 SLC13A5Q86YT5 568 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 RHOT1Q8IXI2 618 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 TMEM174Q8WUU8 243 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 DPEP3Q9H4B8 488 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 ZNF148Q9UQR1 794 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 ARID2Q68CP9 1835 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 SMIM28A0A1B0GU29 152 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 RNF8O76064 485 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 PROSCO94903 275 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 RARAP10276 462 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 DHX9Q08211 1270 aaKnown RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 FBXO47Q5MNV8 452 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 DSTYKQ6XUX3 929 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 MSL3Q8N5Y2 521 aaKnown RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 SLC4A11Q8NBS3 891 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 TSEN2Q8NCE0 465 aaKnown RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 C10orf88Q9H8K7 445 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 ITGA11Q9UKX5 1188 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 TTC7AQ9ULT0 858 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 GOLGA6L10A6NI86 522 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 FAM155AB1AL88 458 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 ATP8B1O43520 1251 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 KRT14P02533 472 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 HPDP32754 393 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 AFF1P51825 1210 aaKnown RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 CALCOCO2Q13137 446 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 SYCP2LQ5T4T6 812 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 ZNF365Q70YC5 407 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 SCUBE3Q8IX30 993 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 CCDC33Q8N5R6 958 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 WNT8BQ93098 351 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 CHST7Q9NS84 486 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 SAE1Q9UBE0 346 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 IP6K2Q9UHH9 426 aa11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 BARX2Q9UMQ3 279 aaPredicted RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 UBQLN1Q9UMX0 589 aaKnown RBP11.42□□□□□ -0.58
CSPG4P5-201ENST00000558731 E5RJQ4 531 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 MMP8P22894 467 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 MNAT1P51948 309 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 HP1BP3Q5SSJ5 553 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 CEP85LQ5SZL2 805 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 JAMLQ86YT9 394 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 B3GNT5Q9BYG0 378 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 RAB17Q9H0T7 212 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 RNF40O75150 1001 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 CTNNA1P35221 906 aaKnown RBP11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 ADCY8P40145 1251 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 SCNN1GP51170 649 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 FAM187BQ17R55 369 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 PPP6R3Q5H9R7 873 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 PPP1R26Q5T8A7 1209 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 TXNRD3NBQ6F5E7 133 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 FAM228AQ86W67 206 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 LINC01465Q8N7H1 131 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 MRRFQ96E11 262 aaKnown RBP11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 NFKBIZQ9BYH8 718 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 HPCAL4Q9UM19 191 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 PCDHA3Q9Y5H8 950 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 A0A0G2JMZ2 1700 aa11.41□□□□□ -0.58
CSPG4P5-201ENST00000558731 H0YHG0 523 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 SEPT4O43236 478 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 XPOTO43592 962 aaKnown RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 ECEL1O95672 775 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 LMO2P25791 158 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 GNL1P36915 607 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 MRPS6P82932 125 aaKnown RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 GLE1Q53GS7 698 aaKnown RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 PRELID2Q8N945 189 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 APPL2Q8NEU8 664 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 HNRNPLLQ8WVV9 542 aaKnown RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 OSBPL8Q9BZF1 889 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 GPATCH2LQ9NWQ4 482 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 CYTH4Q9UIA0 394 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 C2CD2Q9Y426 696 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 CILPO75339 1184 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 ERBB2P04626 1255 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 PDGFRAP16234 1089 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 IGFBP6P24592 240 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 ATP1A2P50993 1020 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 CRYBB1P53674 252 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 C1QBPQ07021 282 aaKnown RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 TAF5Q15542 800 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 C15orf59Q2T9L4 293 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 TAF2Q6P1X5 1199 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 FOXR1Q6PIV2 292 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 SNX27Q96L92 541 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 OSBPL7Q9BZF2 842 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 KPNA7A9QM74 516 aa11.4□□□□□ -0.58
CSPG4P5-201ENST00000558731 ATP2C2O75185 946 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms