RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 KRBA2Q6ZNG9 492 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 PJA1Q8NG27 643 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 GIPC2Q8TF65 315 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 DEPDC1BQ8WUY9 529 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 ZNF516Q92618 1163 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 MKNK1Q9BUB5 465 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 ATXN3LQ9H3M9 355 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 GOLPH3LQ9H4A5 285 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 SLITRK6Q9H5Y7 841 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 IL21Q9HBE4 155 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 TRPV5Q9NQA5 729 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 DLGAP2Q9P1A6 1054 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 GTF3C4Q9UKN8 822 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 VPS13AQ96RL7 3174 aa16.62■□□□□ 0.25
CSHL1-208ENST00000558609 KANSL1LA0AUZ9 987 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 RHOBTB3O94955 611 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 WARSP23381 471 aaKnown RBP16.61■□□□□ 0.25
CSHL1-208ENST00000558609 WEE1P30291 646 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 CDC25CP30307 473 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 CLDN10P78369 228 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 DPYDQ12882 1025 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 GRM2Q14416 872 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 TAF12Q16514 161 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 ARHGAP15Q53QZ3 475 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 FAM171BQ6P995 826 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 MFSD6LQ8IWD5 586 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 KBTBD7Q8WVZ9 684 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 CCDC47Q96A33 483 aaKnown RBP16.61■□□□□ 0.25
CSHL1-208ENST00000558609 PI4K2AQ9BTU6 479 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 OSBPL6Q9BZF3 934 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 FOXQ1Q9C009 403 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 BRD9Q9H8M2 597 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 GDPD2Q9HCC8 539 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 DCHS1Q96JQ0 3298 aa16.61■□□□□ 0.25
CSHL1-208ENST00000558609 PRR23AA6NEV1 266 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 HEPACAM2A8MVW5 462 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 ZNF202O95125 648 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 STAU1O95793 577 aaKnown RBP16.6■□□□□ 0.25
CSHL1-208ENST00000558609 DCNP07585 359 aaKnown RBP16.6■□□□□ 0.25
CSHL1-208ENST00000558609 PRR29P0C7W0 189 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 HMGA1P17096 107 aaKnown RBP16.6■□□□□ 0.25
CSHL1-208ENST00000558609 LMO2P25791 158 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 AP3M2P53677 418 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 RPL10AP62906 217 aaKnown RBP16.6■□□□□ 0.25
CSHL1-208ENST00000558609 NUCB2P80303 420 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 CFAP221Q4G0U5 840 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 STXBP5Q5T5C0 1151 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 GPR158Q5T848 1215 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 ARID3BQ8IVW6 561 aaPredicted RBP16.6■□□□□ 0.25
CSHL1-208ENST00000558609 PLEKHO2Q8TD55 490 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 PARD3BQ8TEW8 1205 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 IRF7Q92985 503 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 FUBP3Q96I24 572 aaKnown RBP eCLIP16.6■□□□□ 0.25
CSHL1-208ENST00000558609 MMS19Q96T76 1030 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 NELL2Q99435 816 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 TASP1Q9H6P5 420 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 CDH9Q9ULB4 789 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 SPTBN4Q9H254 2564 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 F5P12259 2224 aa16.6■□□□□ 0.25
CSHL1-208ENST00000558609 MYBPHLA2RUH7 354 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 HCRTO43612 131 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 TACC1O75410 805 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 KIF20AO95235 890 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 NR3C1P04150 777 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 CSH1P0DML2 217 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 CSH2P0DML3 217 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 CYP2F1P24903 491 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 GDI1P31150 447 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 ATICP31939 592 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 NBL1P41271 181 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 TRPC3Q13507 836 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 KCNB1Q14721 858 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 ANGPT1Q15389 498 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 TMEM150AQ86TG1 271 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 SPATA2LQ8IUW3 424 aaPredicted RBP16.59■□□□□ 0.25
CSHL1-208ENST00000558609 RSPRY1Q96DX4 576 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 GCNAQ96QF7 691 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 SYT15Q9BQS2 421 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 XYLT2Q9H1B5 865 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 HEBP1Q9NRV9 189 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 OBP2AQ9NY56 170 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 ZMYM5Q9UJ78 669 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 TRAF3IP3Q9Y228 551 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 NCANO14594 1321 aa16.59■□□□□ 0.25
CSHL1-208ENST00000558609 SHISA7A6NL88 538 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 LRRIQ3A6PVS8 624 aaPredicted RBP16.58■□□□□ 0.24
CSHL1-208ENST00000558609 ZNF263O14978 683 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 ATP2C2O75185 946 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 F11P03951 625 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 GLULP15104 373 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 GNL1P36915 607 aaPredicted RBP16.58■□□□□ 0.24
CSHL1-208ENST00000558609 MAGEA11P43364 429 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 CASP4P49662 377 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 GPR15P49685 360 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 NLRP12P59046 1061 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 MYL6P60660 151 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 FOXK2Q01167 660 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 FCHO2Q0JRZ9 810 aa16.58■□□□□ 0.24
CSHL1-208ENST00000558609 MAPRE1Q15691 268 aaKnown RBP16.58■□□□□ 0.24
CSHL1-208ENST00000558609 DDR2Q16832 855 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms