RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 KREMEN1Q96MU8 473 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 CRISPLD1Q9H336 500 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 PLEKHA4Q9H4M7 779 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 CYP4F11Q9HBI6 524 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 UBE2TQ9NPD8 197 aaPredicted RBP18.6■□□□□ 0.57
TPM1-214ENST00000558544 PRDM6Q9NQX0 595 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 DZANK1Q9NVP4 752 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 ABI2Q9NYB9 513 aaPredicted RBP18.6■□□□□ 0.57
TPM1-214ENST00000558544 C5orf42Q9H799 3197 aa18.6■□□□□ 0.57
TPM1-214ENST00000558544 RFPL2O75678 378 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 PTPN1P18031 435 aaKnown RBP18.59■□□□□ 0.57
TPM1-214ENST00000558544 KCNA5P22460 613 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 ELF1P32519 619 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 KLK7P49862 253 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 YWHAEP62258 255 aaKnown RBP18.59■□□□□ 0.57
TPM1-214ENST00000558544 FANCCQ00597 558 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 CLUL1Q15846 466 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 NFE2Q16621 373 aaPredicted RBP18.59■□□□□ 0.57
TPM1-214ENST00000558544 FILIP1LQ4L180 1135 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 ZNF394Q53GI3 561 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 FAM171BQ6P995 826 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 ELMSAN1Q6PJG2 1045 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 TTC39CQ8N584 583 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 C12orf76Q8N812 135 aaPredicted RBP18.59■□□□□ 0.57
TPM1-214ENST00000558544 ATAD1Q8NBU5 361 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 WHAMMQ8TF30 809 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 HDAC7Q8WUI4 952 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 HLA-CQ95604 372 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 TNIP3Q96KP6 325 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 APOL5Q9BWW9 433 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 NT5C1AQ9BXI3 368 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 ELOVL4Q9GZR5 314 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 RTN4Q9NQC3 1192 aaKnown RBP18.59■□□□□ 0.57
TPM1-214ENST00000558544 DPP7Q9UHL4 492 aa18.59■□□□□ 0.57
TPM1-214ENST00000558544 AJAP1Q9UKB5 411 aaPredicted RBP18.59■□□□□ 0.57
TPM1-214ENST00000558544 GREB1Q4ZG55 1949 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.58■□□□□ 0.57
TPM1-214ENST00000558544 A0A1B0GTH6 734 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 H3BQ06 376 aaPredicted RBP18.58■□□□□ 0.57
TPM1-214ENST00000558544 PRRG1O14668 218 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 TEX33O43247 280 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 CYP27A1Q02318 531 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 DUSP4Q13115 394 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 SYCP1Q15431 976 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 PTPN21Q16825 1174 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 RARS2Q5T160 578 aaKnown RBP18.58■□□□□ 0.57
TPM1-214ENST00000558544 DPY19L2P1Q6NXN4 242 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 SPATA2LQ8IUW3 424 aaPredicted RBP18.58■□□□□ 0.57
TPM1-214ENST00000558544 TCEAL8Q8IYN2 117 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 TTC9BQ8N6N2 239 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 MYCBPAPQ8TBZ2 947 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 SPPL2BQ8TCT7 592 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 PCED1BQ96HM7 432 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 NAP1L5Q96NT1 182 aaPredicted RBP18.58■□□□□ 0.57
TPM1-214ENST00000558544 RHOBTB2Q9BYZ6 727 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 FAM124BQ9H5Z6 455 aaPredicted RBP18.58■□□□□ 0.57
TPM1-214ENST00000558544 SFXN1Q9H9B4 322 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 SLC27A5Q9Y2P5 690 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 PCDHB5Q9Y5E4 795 aa18.58■□□□□ 0.57
TPM1-214ENST00000558544 PATJQ8NI35 1801 aa18.58■□□□□ 0.56
TPM1-214ENST00000558544 DENND4AQ7Z401 1863 aa18.58■□□□□ 0.56
TPM1-214ENST00000558544 ZMYND10O75800 440 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 ACO1P21399 889 aaKnown RBP18.57■□□□□ 0.56
TPM1-214ENST00000558544 SMARCB1Q12824 385 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 ARHGAP44Q17R89 818 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 PPM1LQ5SGD2 360 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 SYCE2Q6PIF2 218 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 C4orf50Q6ZRC1 276 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 CCDC149Q6ZUS6 474 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 GAS2L3Q86XJ1 694 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 FEZF2Q8TBJ5 459 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 C2orf15Q8WU43 125 aaKnown RBP18.57■□□□□ 0.56
TPM1-214ENST00000558544 MSLNLQ96KJ4 702 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 PCMTD1Q96MG8 357 aaPredicted RBP18.57■□□□□ 0.56
TPM1-214ENST00000558544 SEPT5Q99719 369 aaPredicted RBP18.57■□□□□ 0.56
TPM1-214ENST00000558544 MAFFQ9ULX9 164 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 COG5Q9UP83 839 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 SIK3Q9Y2K2 1263 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 YIPF1Q9Y548 306 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 PCDHB4Q9Y5E5 795 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 INSL5Q9Y5Q6 135 aa18.57■□□□□ 0.56
TPM1-214ENST00000558544 SOAT2O75908 522 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 TRIM21P19474 475 aaKnown RBP18.56■□□□□ 0.56
TPM1-214ENST00000558544 RAD23BP54727 409 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 MFAP3P55082 362 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 MAPRE1Q15691 268 aaKnown RBP18.56■□□□□ 0.56
TPM1-214ENST00000558544 MGAT5BQ3V5L5 792 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 KLHDC7AQ5VTJ3 777 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 IQCEQ6IPM2 695 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 TMEM270Q6UE05 265 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 TMC5Q6UXY8 1006 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 ENOSF1Q7L5Y1 443 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 CRYBG2Q8N1P7 616 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 C12orf29Q8N999 325 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 SLC4A11Q8NBS3 891 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 FAM81BQ96LP2 452 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 ERGIC2Q96RQ1 377 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 RBSNQ9H1K0 784 aa18.56■□□□□ 0.56
TPM1-214ENST00000558544 FAM207AQ9NSI2 230 aaPredicted RBP18.56■□□□□ 0.56
TPM1-214ENST00000558544 FAM49BQ9NUQ9 324 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms