RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 CPA6Q8N4T0 437 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 TTC9BQ8N6N2 239 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 MDGA1Q8NFP4 955 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 CCDC26Q8TAB7 109 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 RIN3Q8TB24 985 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 USP33Q8TEY7 942 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 CD101Q93033 1021 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 LRIG1Q96JA1 1093 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 IFT74Q96LB3 600 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 ACAP3Q96P50 834 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 ACO2Q99798 780 aaKnown RBP7.35□□□□□ -1.23
LRRC28-207ENST00000558500 LPIN3Q9BQK8 851 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 KIF9Q9HAQ2 790 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 HSFX1Q9UBD0 423 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 TUBGCP4Q9UGJ1 667 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 RAXQ9Y2V3 346 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 SNX14Q9Y5W7 946 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 ADGRG1Q9Y653 693 aa7.35□□□□□ -1.23
LRRC28-207ENST00000558500 LOC400499M0QZD8 3231 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 ARHGEF35A5YM69 484 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 ABLIM1O14639 778 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 OPHN1O60890 802 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 MED24O75448 989 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 CD59P13987 128 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 ATF6P18850 670 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 TYMPP19971 482 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 PROZP22891 400 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 HSPA4P34932 840 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 HOXD12P35452 270 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 P2RY2P41231 377 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 DPP6P42658 865 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 TUFMP49411 452 aaKnown RBP7.34□□□□□ -1.23
LRRC28-207ENST00000558500 AARSP49588 968 aaKnown RBP eCLIP7.34□□□□□ -1.23
LRRC28-207ENST00000558500 ATXN3P54252 364 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-207ENST00000558500 C19orf57Q0VDD7 668 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 TOB2Q14106 344 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-207ENST00000558500 VEPH1Q14D04 833 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 PROX2Q3B8N5 592 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 SPDYCQ5MJ68 293 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 PEAR1Q5VY43 1037 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-207ENST00000558500 LYSMD4Q5XG99 296 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 OVOS1Q6IE37 1185 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 CPLX2Q6PUV4 134 aaKnown RBP7.34□□□□□ -1.23
LRRC28-207ENST00000558500 TMEM150AQ86TG1 271 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 TMEFF1Q8IYR6 380 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 TMEM130Q8N3G9 435 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 MDM1Q8TC05 714 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 ADAMTS14Q8WXS8 1223 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 RNF166Q96A37 237 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-207ENST00000558500 MTMR9Q96QG7 549 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 FNBP1Q96RU3 617 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 SEPT5Q99719 369 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-207ENST00000558500 GTPBP2Q9BX10 602 aaKnown RBP7.34□□□□□ -1.23
LRRC28-207ENST00000558500 MRPL4Q9BYD3 311 aaKnown RBP7.34□□□□□ -1.23
LRRC28-207ENST00000558500 ECT2Q9H8V3 914 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 POLD4Q9HCU8 107 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 TUFT1Q9NNX1 390 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 GJB4Q9NTQ9 266 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 TDP1Q9NUW8 608 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 SLC6A14Q9UN76 642 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 ACACAQ13085 2346 aa7.34□□□□□ -1.23
LRRC28-207ENST00000558500 HECTD1Q9ULT8 2610 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 TENM4Q6N022 2769 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 KALRNO60229 2985 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 PHLPP2Q6ZVD8 1323 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 ATXN2Q99700 1313 aaKnown RBP7.33□□□□□ -1.24
LRRC28-207ENST00000558500 ADAMTS20P59510 1910 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 CYSRT1A8MQ03 144 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 NEMFO60524 1076 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 CFIP05156 583 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 FTH1P19P0C7X4 201 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 XBP1P17861 261 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 DDX6P26196 483 aaKnown RBP eCLIP7.33□□□□□ -1.24
LRRC28-207ENST00000558500 PSMA5P28066 241 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 NMT1P30419 496 aaKnown RBP7.33□□□□□ -1.24
LRRC28-207ENST00000558500 LRPAP1P30533 357 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 GFPT1Q06210 699 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-207ENST00000558500 NR5A1Q13285 461 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 ZNF268Q14587 947 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-207ENST00000558500 TRIP6Q15654 476 aaKnown RBP7.33□□□□□ -1.24
LRRC28-207ENST00000558500 TAF12Q16514 161 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 CRY1Q16526 586 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 SLC10A6Q3KNW5 377 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 C2orf27AQ580R0 203 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 TXNDC8Q6A555 127 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 ARMCX5Q6P1M9 558 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 MPZL3Q6UWV2 235 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 DSTYKQ6XUX3 929 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 TAS1R3Q7RTX0 852 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 MINDY1Q8N5J2 469 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 MAB21L3Q8N8X9 362 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 CEP76Q8TAP6 659 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 GIPC2Q8TF65 315 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 OSCP1Q8WVF1 389 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 RLN3Q8WXF3 142 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 KIFAP3Q92845 792 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 TNFRSF25Q93038 417 aa7.33□□□□□ -1.24
LRRC28-207ENST00000558500 ZNF274Q96GC6 653 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-207ENST00000558500 SPACA7Q96KW9 195 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms