RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 MTIF2P46199 727 aaKnown RBP13.34□□□□□ -0.27
LRRC28-206ENST00000558471 NTHL1P78549 312 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 TWF1Q12792 350 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 SKOR2Q2VWA4 1001 aaPredicted RBP13.34□□□□□ -0.27
LRRC28-206ENST00000558471 GRASPQ7Z6J2 395 aaPredicted RBP13.34□□□□□ -0.27
LRRC28-206ENST00000558471 FAM114A1Q8IWE2 563 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 LMO3Q8TAP4 145 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 SPPL2BQ8TCT7 592 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 PHF7Q9BWX1 381 aaPredicted RBP13.34□□□□□ -0.27
LRRC28-206ENST00000558471 CYP3A43Q9HB55 503 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 WDR6Q9NNW5 1121 aaKnown RBP13.34□□□□□ -0.27
LRRC28-206ENST00000558471 HCFC1R1Q9NWW0 138 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 CEP72Q9P209 647 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 DNMT3BQ9UBC3 853 aaKnown RBP13.34□□□□□ -0.27
LRRC28-206ENST00000558471 HSFX1Q9UBD0 423 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 PRKAG3Q9UGI9 489 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 YIPF1Q9Y548 306 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 DOCK8Q8NF50 2099 aa13.33□□□□□ -0.27
LRRC28-206ENST00000558471 MYO10Q9HD67 2058 aa13.33□□□□□ -0.27
LRRC28-206ENST00000558471 SYCE3A1L190 88 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 HAPLN1P10915 354 aaPredicted RBP13.33□□□□□ -0.28
LRRC28-206ENST00000558471 PTPN2P17706 415 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 CYP2F1P24903 491 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 ALDH1A3P47895 512 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 TUFMP49411 452 aaKnown RBP13.33□□□□□ -0.28
LRRC28-206ENST00000558471 NDST1P52848 882 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 ZP2Q05996 745 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 CETN1Q12798 172 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 LRMPQ12912 555 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 NFKBIBQ15653 356 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 MGAT5BQ3V5L5 792 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 ANO6Q4KMQ2 910 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 ADHFE1Q8IWW8 467 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 EHBP1Q8NDI1 1231 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 MYCBPAPQ8TBZ2 947 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 MYLPFQ96A32 169 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 FAXDC2Q96IV6 333 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 RPGRIP1Q96KN7 1286 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 SEPT5Q99719 369 aaPredicted RBP13.33□□□□□ -0.28
LRRC28-206ENST00000558471 FUCA2Q9BTY2 467 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 FANCLQ9NW38 375 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 MAGEC2Q9UBF1 373 aaPredicted RBP13.33□□□□□ -0.28
LRRC28-206ENST00000558471 HMGXB4Q9UGU5 601 aa13.33□□□□□ -0.28
LRRC28-206ENST00000558471 MYH10P35580 1976 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 C19orf67A6NJJ6 358 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 KCNJ18B7U540 433 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 ATF6P18850 670 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 CD58P19256 250 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 SP100P23497 879 aaPredicted RBP13.32□□□□□ -0.28
LRRC28-206ENST00000558471 EPHB3P54753 998 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 CYP27A1Q02318 531 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 INCA1Q0VD86 236 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 ORC1Q13415 861 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 KCNJ12Q14500 433 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 NCAPHQ15003 741 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 MAPRE1Q15691 268 aaKnown RBP13.32□□□□□ -0.28
LRRC28-206ENST00000558471 MAN2A1Q16706 1144 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 CFAP221Q4G0U5 840 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 TCP11X2Q5H9J9 407 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 MDH1BQ5I0G3 518 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 ACOT1Q86TX2 421 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 UNC93AQ86WB7 457 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 SPATA2LQ8IUW3 424 aaPredicted RBP13.32□□□□□ -0.28
LRRC28-206ENST00000558471 CRYBG2Q8N1P7 616 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 B3GALNT2Q8NCR0 500 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 WHAMMQ8TF30 809 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 PCED1BQ96HM7 432 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 ZNF512Q96ME7 567 aaPredicted RBP13.32□□□□□ -0.28
LRRC28-206ENST00000558471 TWNKQ96RR1 684 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 UHRF1Q96T88 793 aaPredicted RBP13.32□□□□□ -0.28
LRRC28-206ENST00000558471 ARID3AQ99856 593 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 TUBGCP2Q9BSJ2 902 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 ABCB6Q9NP58 842 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 CD320Q9NPF0 282 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 CLUHO75153 1309 aa13.32□□□□□ -0.28
LRRC28-206ENST00000558471 GREB1Q4ZG55 1949 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 LOC730098B7Z3J9 87 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 CILPO75339 1184 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 RHOP08100 348 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 BDNFP23560 247 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 EEF1GP26641 437 aaKnown RBP13.31□□□□□ -0.28
LRRC28-206ENST00000558471 GPR15P49685 360 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 MYL5Q02045 173 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 PLD1Q13393 1074 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 CUL2Q13617 745 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 PABPC1LQ4VXU2 614 aaKnown RBP13.31□□□□□ -0.28
LRRC28-206ENST00000558471 VWA3BQ502W6 1294 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 MIIPQ5JXC2 388 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 CDKAL1Q5VV42 579 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 C4orf50Q6ZRC1 276 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 DNAJB7Q7Z6W7 309 aaPredicted RBP13.31□□□□□ -0.28
LRRC28-206ENST00000558471 HS6ST3Q8IZP7 471 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 ELMOD1Q8N336 334 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 GPR152Q8TDT2 470 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 GIPC2Q8TF65 315 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 FUBP3Q96I24 572 aaKnown RBP eCLIP13.31□□□□□ -0.28
LRRC28-206ENST00000558471 TNIP3Q96KP6 325 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 NT5C1BQ96P26 610 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 CORO1BQ9BR76 489 aa13.31□□□□□ -0.28
LRRC28-206ENST00000558471 CRACR2AQ9BSW2 395 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms