RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 UBALD2Q8IYN6 164 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 EHBP1Q8NDI1 1231 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 SLC7A14Q8TBB6 771 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 SUSD3Q96L08 255 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 MFSD14AQ96MC6 490 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 HAUS4Q9H6D7 363 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 RPF1Q9H9Y2 349 aaKnown RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 KCNK12Q9HB15 430 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 LZTFL1Q9NQ48 299 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 RAB21Q9UL25 225 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 UBQLN1Q9UMX0 589 aaKnown RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 EXOC7Q9UPT5 735 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 ARIH1Q9Y4X5 557 aaPredicted RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 STYXL1Q9Y6J8 313 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 KMT2EQ8IZD2 1858 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 DMDP11532 3685 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 PPEF2O14830 753 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 CCL16O15467 120 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 GNA14O95837 355 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 NFICP08651 508 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 CYP3A5P20815 502 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 RPL13P26373 211 aaKnown RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 HOXA9P31269 272 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 PLA2G5P39877 138 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 CDK17Q00537 523 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 MEA1Q16626 185 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 SLC8B1Q6J4K2 584 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 GET4Q7L5D6 327 aaPredicted RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 HS2ST1Q7LGA3 356 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 GRASPQ7Z6J2 395 aaPredicted RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 SLC9A9Q8IVB4 645 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 SLC35F6Q8N357 371 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 RSAD2Q8WXG1 361 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 FAM212AQ96EL1 285 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 PARD6BQ9BYG5 372 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 DMAC2Q9NW81 257 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 EPS15L1Q9UBC2 864 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 FBXL5Q9UKA1 691 aa11.04□□□□□ -0.64
TPM1-212ENST00000558347 LUC7L2Q9Y383 392 aaKnown RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 EPN1Q9Y6I3 576 aaPredicted RBP11.04□□□□□ -0.64
TPM1-212ENST00000558347 NOTCH4Q99466 2003 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 A0A1W2PQJ5 194 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 H7C4K7 107 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 M0QZQ0 153 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 CETN3O15182 167 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 ERLIN1O75477 346 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 ABLIM3O94929 683 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 NDUFA10O95299 355 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 HNRNPA1P09651 372 aaKnown RBP eCLIP11.03□□□□□ -0.64
TPM1-212ENST00000558347 MARSP56192 900 aaKnown RBP11.03□□□□□ -0.64
TPM1-212ENST00000558347 ARPP19P56211 112 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 KRT83P78385 493 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 ADAM9Q13443 819 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 IER5LQ5T953 404 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 JADE1Q6IE81 842 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 CRELD2Q6UXH1 353 aaPredicted RBP11.03□□□□□ -0.64
TPM1-212ENST00000558347 CD302Q8IX05 232 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 CCDC170Q8IYT3 715 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 FBXL6Q8N531 539 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 ACRBPQ8NEB7 543 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 ZSWIM2Q8NEG5 633 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 ZNF461Q8TAF7 563 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 AGPAT3Q9NRZ7 376 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 HCFC1R1Q9NWW0 138 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 AGO2Q9UKV8 859 aaKnown RBP11.03□□□□□ -0.64
TPM1-212ENST00000558347 PCDHB8Q9UN66 801 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 POLIQ9UNA4 740 aa11.03□□□□□ -0.64
TPM1-212ENST00000558347 TIMM13Q9Y5L4 95 aaPredicted RBP11.03□□□□□ -0.64
TPM1-212ENST00000558347 MUC6Q6W4X9 2439 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 CCDC66A2RUB6 948 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 SLC16A3O15427 465 aaKnown RBP11.02□□□□□ -0.65
TPM1-212ENST00000558347 XPOTO43592 962 aaKnown RBP11.02□□□□□ -0.65
TPM1-212ENST00000558347 NARSO43776 548 aaKnown RBP11.02□□□□□ -0.65
TPM1-212ENST00000558347 NR3C1P04150 777 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 FSHRP23945 695 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 NR2F2P24468 414 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 CYLC1P35663 651 aaPredicted RBP11.02□□□□□ -0.65
TPM1-212ENST00000558347 AARSP49588 968 aaKnown RBP eCLIP11.02□□□□□ -0.65
TPM1-212ENST00000558347 VCPP55072 806 aaKnown RBP11.02□□□□□ -0.65
TPM1-212ENST00000558347 TDGQ13569 410 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 TMEM132DQ14C87 1099 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 CTXN3Q4LDR2 81 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 SLFN12LQ6IEE8 588 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 ZNF280DQ6N043 979 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 SYCP3Q8IZU3 236 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 APPL2Q8NEU8 664 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 ST13P5Q8NFI4 369 aaPredicted RBP11.02□□□□□ -0.65
TPM1-212ENST00000558347 POMGNT1Q8WZA1 660 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 FAM122AQ96E09 287 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 CNOT6LQ96LI5 555 aaKnown RBP11.02□□□□□ -0.65
TPM1-212ENST00000558347 ERGIC2Q96RQ1 377 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 MKNK1Q9BUB5 465 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 TTYH3Q9C0H2 523 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 ZNHIT6Q9NWK9 470 aaKnown RBP11.02□□□□□ -0.65
TPM1-212ENST00000558347 DNMT3BQ9UBC3 853 aaKnown RBP11.02□□□□□ -0.65
TPM1-212ENST00000558347 TSC2P49815 1807 aa11.02□□□□□ -0.65
TPM1-212ENST00000558347 MYO15AQ9UKN7 3530 aa11.01□□□□□ -0.65
TPM1-212ENST00000558347 CTAGE15A4D2H0 777 aa11.01□□□□□ -0.65
TPM1-212ENST00000558347 MAP2K7O14733 419 aa11.01□□□□□ -0.65
TPM1-212ENST00000558347 SPTLC1O15269 473 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms