RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 ADAM15Q13444 863 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 KCNC3Q14003 757 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 ARHGAP44Q17R89 818 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 SLC39A12Q504Y0 691 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 FIGNQ5HY92 759 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 IQCEQ6IPM2 695 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 GJB7Q6PEY0 223 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 TMEM270Q6UE05 265 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 CCDC149Q6ZUS6 474 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 LRRTM3Q86VH5 581 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 SPATA2LQ8IUW3 424 aaPredicted RBP11.15□□□□□ -0.62
LRRC28-204ENST00000558172 FMNL3Q8IVF7 1028 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 TCEAL8Q8IYN2 117 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 MICALL1Q8N3F8 863 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 KREMEN2Q8NCW0 462 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 WHAMMQ8TF30 809 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 SHC3Q92529 594 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 KAT5Q92993 513 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 PABPC5Q96DU9 382 aaKnown RBP11.15□□□□□ -0.62
LRRC28-204ENST00000558172 FUBP3Q96I24 572 aaKnown RBP eCLIP11.15□□□□□ -0.62
LRRC28-204ENST00000558172 TMEM209Q96SK2 561 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 PKMYT1Q99640 499 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 NAA15Q9BXJ9 866 aaKnown RBP11.15□□□□□ -0.62
LRRC28-204ENST00000558172 EDEM3Q9BZQ6 932 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 GANQ9H2C0 597 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 ABCB6Q9NP58 842 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 FAM207AQ9NSI2 230 aaPredicted RBP11.15□□□□□ -0.62
LRRC28-204ENST00000558172 DZANK1Q9NVP4 752 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 FBXW11Q9UKB1 542 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 GTF3C4Q9UKN8 822 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 NME7Q9Y5B8 376 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 HCFC2Q9Y5Z7 792 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 GREB1Q4ZG55 1949 aa11.15□□□□□ -0.62
LRRC28-204ENST00000558172 ATP8B3O60423 1300 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 ZNF638Q14966 1978 aaKnown RBP11.14□□□□□ -0.63
LRRC28-204ENST00000558172 MTMR11A4FU01 709 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 HCRTO43612 131 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 NOL4O94818 638 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 OR4Q2P0C623 313 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 VDRP11473 427 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 PBX1P40424 430 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 KLK7P49862 253 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 RAD23BP54727 409 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 BPIFB4P59827 614 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 POLR2FP61218 127 aaKnown RBP11.14□□□□□ -0.63
LRRC28-204ENST00000558172 PSMC1P62191 440 aaKnown RBP11.14□□□□□ -0.63
LRRC28-204ENST00000558172 APBA1Q02410 837 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 ADCY1Q08828 1119 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 RAPGEF1Q13905 1077 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 COL19A1Q14993 1142 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 STILQ15468 1287 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 CFAP221Q4G0U5 840 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 ZNF394Q53GI3 561 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 MDH1BQ5I0G3 518 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 LIN9Q5TKA1 542 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 RNF19BQ6ZMZ0 732 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 CACNA2D4Q7Z3S7 1137 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 ACOT1Q86TX2 421 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 SLC4A11Q8NBS3 891 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 CYFIP2Q96F07 1278 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 HEXIM2Q96MH2 286 aaKnown RBP11.14□□□□□ -0.63
LRRC28-204ENST00000558172 SPAG5Q96R06 1193 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 TWNKQ96RR1 684 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 TRIM5Q9C035 493 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 ELOVL4Q9GZR5 314 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 DPEP3Q9H4B8 488 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 CYP4F11Q9HBI6 524 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 CRTAC1Q9NQ79 661 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 CEP72Q9P209 647 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.14□□□□□ -0.63
LRRC28-204ENST00000558172 FHOD1Q9Y613 1164 aa11.14□□□□□ -0.63
LRRC28-204ENST00000558172 ITIH6Q6UXX5 1313 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 FOXN3O00409 490 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-204ENST00000558172 PRRG1O14668 218 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 ATP2C2O75185 946 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 KRT5P13647 590 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 EPCAMP16422 314 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 HOXB8P17481 243 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-204ENST00000558172 GTF2F1P35269 517 aaKnown RBP eCLIP11.13□□□□□ -0.63
LRRC28-204ENST00000558172 STAT1P42224 750 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 MAGEA11P43364 429 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 ZNF132P52740 706 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 CYP27A1Q02318 531 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 PTK2Q05397 1052 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 DUSP4Q13115 394 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 PLD1Q13393 1074 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 DRAP1Q14919 205 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-204ENST00000558172 CTC1Q2NKJ3 1217 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 SGO2Q562F6 1265 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 ARHGAP17Q68EM7 881 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 LLGL2Q6P1M3 1020 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 VSTM1Q6UX27 236 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 CYP26C1Q6V0L0 522 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 RBBP8NLQ8NC74 664 aaPredicted RBP11.13□□□□□ -0.63
LRRC28-204ENST00000558172 MYLPFQ96A32 169 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 PCED1BQ96HM7 432 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 CEP295NLQ96MC4 621 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 PGLYRP2Q96PD5 576 aa11.13□□□□□ -0.63
LRRC28-204ENST00000558172 HNRNPABQ99729 332 aaKnown RBP11.13□□□□□ -0.63
LRRC28-204ENST00000558172 MED10Q9BTT4 135 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms