RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 JUNDP17535 347 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 PTPN2P17706 415 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 SP100P23497 879 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-223ENST00000557511 FSHRP23945 695 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 GTF2H1P32780 548 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 CASP4P49662 377 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 MMP16P51512 607 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 WNT7BP56706 349 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 PAK1Q13153 545 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 NCOA4Q13772 614 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 SGSM1Q2NKQ1 1148 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 MGAT5BQ3V5L5 792 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 SLC39A12Q504Y0 691 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 DCAF17Q5H9S7 520 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-223ENST00000557511 WDR44Q5JSH3 913 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 CENPPQ6IPU0 288 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 RSPO2Q6UXX9 243 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-223ENST00000557511 C4orf50Q6ZRC1 276 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 CLEC17AQ6ZS10 378 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 GRASPQ7Z6J2 395 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-223ENST00000557511 ITIH5Q86UX2 942 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 PDCL2Q8N4E4 241 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 OR6B3Q8NGW1 331 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 PRR7Q8TB68 274 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 NELFBQ8WX92 580 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 TAF4BQ92750 862 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 CEP63Q96MT8 703 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 GCNAQ96QF7 691 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 SEPT5Q99719 369 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-223ENST00000557511 ACBD6Q9BR61 282 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 IRX2Q9BZI1 471 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-223ENST00000557511 CLSTN2Q9H4D0 955 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.92□□□□□ -0.98
PSEN1-223ENST00000557511 NXF1Q9UBU9 619 aaKnown RBP8.92□□□□□ -0.98
PSEN1-223ENST00000557511 ARMCX3Q9UH62 379 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-223ENST00000557511 SIX4Q9UIU6 781 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 L1RE1Q9UN81 338 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 ASB3Q9Y575 518 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 PCDHB5Q9Y5E4 795 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 INSL5Q9Y5Q6 135 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 ZFP37Q9Y6Q3 630 aaPredicted RBP8.92□□□□□ -0.98
PSEN1-223ENST00000557511 MYO7AQ13402 2215 aa8.92□□□□□ -0.98
PSEN1-223ENST00000557511 ATP8B3O60423 1300 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 PTPRJQ12913 1337 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 A8MXQ7 604 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 LOC730098B7Z3J9 87 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 DXOO77932 396 aaKnown RBP8.91□□□□□ -0.98
PSEN1-223ENST00000557511 FGF19O95750 216 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 STAU1O95793 577 aaKnown RBP8.91□□□□□ -0.98
PSEN1-223ENST00000557511 OR4Q2P0C623 313 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 CCDC192P0DO97 292 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 GNL1P36915 607 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-223ENST00000557511 GCLMP48507 274 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 MYL6P60660 151 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 RPL10AP62906 217 aaKnown RBP8.91□□□□□ -0.98
PSEN1-223ENST00000557511 TWF1Q12792 350 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 DUSP4Q13115 394 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 MORC3Q14149 939 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 PABPC1LQ4VXU2 614 aaKnown RBP8.91□□□□□ -0.98
PSEN1-223ENST00000557511 ZCWPW2Q504Y3 356 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 KRT39Q6A163 491 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 ANKRD40Q6AI12 368 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 PDZD4Q76G19 769 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-223ENST00000557511 GET4Q7L5D6 327 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-223ENST00000557511 RNF135Q8IUD6 432 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 CREBRFQ8IUR6 639 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 SPATA2LQ8IUW3 424 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-223ENST00000557511 ZDHHC14Q8IZN3 488 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 TMEM130Q8N3G9 435 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 MLKLQ8NB16 471 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 TSC1Q92574 1164 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 BORCS6Q96GS4 357 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 CORO1BQ9BR76 489 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 ZCWPW1Q9H0M4 648 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 TMEM8AQ9HCN3 771 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 ASAH2Q9NR71 780 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 ABI2Q9NYB9 513 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-223ENST00000557511 HSFX1Q9UBD0 423 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 LIMD1Q9UGP4 676 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 CDH9Q9ULB4 789 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 CTNND2Q9UQB3 1225 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 MRPS23Q9Y3D9 190 aaKnown RBP8.91□□□□□ -0.98
PSEN1-223ENST00000557511 YIPF1Q9Y548 306 aa8.91□□□□□ -0.98
PSEN1-223ENST00000557511 MTMR11A4FU01 709 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 C2CD4DB7Z1M9 353 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 DCXO43602 365 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 N4BP1O75113 896 aaKnown RBP8.9□□□□□ -0.98
PSEN1-223ENST00000557511 TACC1O75410 805 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 CST3P01034 146 aaPredicted RBP8.9□□□□□ -0.98
PSEN1-223ENST00000557511 C4BPAP04003 597 aaKnown RBP8.9□□□□□ -0.98
PSEN1-223ENST00000557511 RHOP08100 348 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 TRIM49P0CI25 452 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 TRIM49CP0CI26 452 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 PTMSP20962 102 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 WARSP23381 471 aaKnown RBP8.9□□□□□ -0.98
PSEN1-223ENST00000557511 ANXA13P27216 316 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 MXI1P50539 228 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 STX17P56962 302 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 CLDN10P78369 228 aa8.9□□□□□ -0.98
PSEN1-223ENST00000557511 SOWAHAQ2M3V2 549 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms