RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 ASNSP08243 561 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 GM2AP17900 193 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 GJC1P36383 396 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 AP3M2P53677 418 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 FASTKD3Q14CZ7 662 aaKnown RBP17.12■□□□□ 0.33
SHMT2-232ENST00000557487 ZFYVE27Q5T4F4 411 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 ANO7Q6IWH7 933 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 IRGCQ6NXR0 463 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 TMEM270Q6UE05 265 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 ARHGAP24Q8N264 748 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 GPRASP2Q96D09 838 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 VCXQ9H320 206 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 ZNRF3Q9ULT6 936 aa17.12■□□□□ 0.33
SHMT2-232ENST00000557487 TCP10L2B9ZVM9 353 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 AHCYL1O43865 530 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 CBX6O95503 412 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 CALCAP01258 141 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 KRT10P13645 584 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 OCRLQ01968 901 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 KAZNQ674X7 775 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 CIAPIN1Q6FI81 312 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 LLGL2Q6P1M3 1020 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 DNAJC24Q6P3W2 148 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 BANPQ8N9N5 519 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 GLIS1Q8NBF1 620 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 NSL1Q96IY1 281 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 SH2D3AQ9BRG2 576 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 PDCD2LQ9BRP1 358 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 MANSC1Q9H8J5 431 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 NPHS2Q9NP85 383 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 ZNF70Q9UC06 446 aaPredicted RBP17.11■□□□□ 0.33
SHMT2-232ENST00000557487 POLIQ9UNA4 740 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 A0A1W2PPM1 405 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 SGK1O00141 431 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 NVLO15381 856 aaKnown RBP17.11■□□□□ 0.33
SHMT2-232ENST00000557487 VNN1O95497 513 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 FESP07332 822 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 LINGO3P0C6S8 592 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 ZSCAN5DPP0CG00 497 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 ATP4AP20648 1035 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 CDKN2BP42772 138 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 ZNF132P52740 706 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 GPX6P59796 221 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 MUM1Q2TAK8 710 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 C11orf91Q3C1V1 193 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 DAB2IPQ5VWQ8 1189 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 MTDHQ86UE4 582 aaKnown RBP17.11■□□□□ 0.33
SHMT2-232ENST00000557487 ZNF483Q8TF39 744 aaPredicted RBP17.11■□□□□ 0.33
SHMT2-232ENST00000557487 MZB1Q8WU39 189 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 CGRRF1Q99675 332 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 SH3GL3Q99963 347 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 SLC24A3Q9HC58 644 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 AGO2Q9UKV8 859 aaKnown RBP17.11■□□□□ 0.33
SHMT2-232ENST00000557487 LRCH1Q9Y2L9 728 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 IVNS1ABPQ9Y6Y0 642 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 CLUHO75153 1309 aa17.11■□□□□ 0.33
SHMT2-232ENST00000557487 IQANK1A0A1B0GTG1 560 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 TCRBV5S1A1TA0A578 114 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 SKAP2O75563 359 aaPredicted RBP17.1■□□□□ 0.33
SHMT2-232ENST00000557487 SPAG6O75602 509 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 PSAPP07602 524 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 SKIP12755 728 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 EIF2AK2P19525 551 aaKnown RBP17.1■□□□□ 0.33
SHMT2-232ENST00000557487 GLRA2P23416 452 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 CBLBQ13191 982 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 ZYXQ15942 572 aaKnown RBP17.1■□□□□ 0.33
SHMT2-232ENST00000557487 MAPK6Q16659 721 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 WDR72Q3MJ13 1102 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 TBC1D10BQ4KMP7 808 aaPredicted RBP17.1■□□□□ 0.33
SHMT2-232ENST00000557487 C2CD6Q53TS8 623 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 TRIM68Q6AZZ1 485 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 PASD1Q8IV76 773 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 ZNF276Q8N554 614 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 TMEM35BQ8NCS4 154 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 ZNF526Q8TF50 670 aaPredicted RBP17.1■□□□□ 0.33
SHMT2-232ENST00000557487 PTCD3Q96EY7 689 aaKnown RBP17.1■□□□□ 0.33
SHMT2-232ENST00000557487 TAAR1Q96RJ0 339 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 PAFAH2Q99487 392 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 FAM167BQ9BTA0 163 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 SLC38A10Q9HBR0 1119 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 PXMP2Q9NR77 195 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 ZNF541Q9H0D2 1346 aa17.1■□□□□ 0.33
SHMT2-232ENST00000557487 A8MXQ7 604 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 PI4K2BG5E9Z4 385 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 ATP9AO75110 1047 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 STBD1O95210 358 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 DHRS4L1P0CG22 281 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 NEFHP12036 1026 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 ADRA1DP25100 572 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 ARFIP2P53365 341 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 CCDC6Q16204 474 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 WDR78Q5VTH9 848 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 NAIF1Q69YI7 327 aaPredicted RBP17.09■□□□□ 0.33
SHMT2-232ENST00000557487 DCUN1D2Q6PH85 259 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 SAMD1Q6SPF0 538 aaPredicted RBP17.09■□□□□ 0.33
SHMT2-232ENST00000557487 TAS1R3Q7RTX0 852 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 NAT8LQ8N9F0 302 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 ZNF606Q8WXB4 792 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 ZNF333Q96JL9 665 aa17.09■□□□□ 0.33
SHMT2-232ENST00000557487 RMDN3Q96TC7 470 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms