RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CEP120Q8N960 986 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 KDF1Q8NAX2 398 aaPredicted RBP6.4□□□□□ -1.38
VPS33B-207ENST00000557470 TTC8Q8TAM2 541 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 SHKBP1Q8TBC3 707 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 CSGALNACT1Q8TDX6 532 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 ZNF512Q96ME7 567 aaPredicted RBP6.4□□□□□ -1.38
VPS33B-207ENST00000557470 ZMAT2Q96NC0 199 aaKnown RBP6.4□□□□□ -1.38
VPS33B-207ENST00000557470 MTMR9Q96QG7 549 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 INSM2Q96T92 566 aaPredicted RBP6.4□□□□□ -1.38
VPS33B-207ENST00000557470 ARRDC1-AS1Q9H2J1 176 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 SLITRK6Q9H5Y7 841 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 ASAH2Q9NR71 780 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 VTI1BQ9UEU0 232 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 DMGDHQ9UI17 866 aaKnown RBP6.4□□□□□ -1.38
VPS33B-207ENST00000557470 CYP46A1Q9Y6A2 500 aa6.4□□□□□ -1.38
VPS33B-207ENST00000557470 DNMT3AQ9Y6K1 912 aaPredicted RBP6.4□□□□□ -1.38
VPS33B-207ENST00000557470 FASNP49327 2511 aaKnown RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 AKAP13Q12802 2813 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 RALGAPA1Q6GYQ0 2036 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 DSPP15924 2871 aaKnown RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 A0A1W2PRU2 124 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 MYBPHLA2RUH7 354 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 SPECC1L-ADORA2AF8WAN1 911 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 CHADO15335 359 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 MEFVO15553 781 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 EXTL3O43909 919 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 STK10O94804 968 aaKnown RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 REC8O95072 547 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 CTDNEP1O95476 244 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 VNN2O95498 520 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 ZNF806P0C7X5 589 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 CYP11B2P19099 503 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 HOXA6P31267 233 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 ATP1A2P50993 1020 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 KPNA1P52294 538 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 EFNA5P52803 228 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 YARSP54577 528 aaKnown RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 MLLT6P55198 1093 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 OSTNP61366 133 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 PTSQ03393 145 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 FCHO2Q0JRZ9 810 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 CCINQ13939 588 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 COL9A2Q14055 689 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 PON2Q15165 354 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 PPP2R5AQ15172 486 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 OCLNQ16625 522 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 XKR4Q5GH76 650 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 DGKKQ5KSL6 1271 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 STXBP5Q5T5C0 1151 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 STPG1Q5TH74 334 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 ZNF280DQ6N043 979 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 C1orf228Q6PIY5 440 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 FILIP1Q7Z7B0 1213 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 YAF2Q8IY57 180 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 C12orf50Q8NA57 414 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 LEMD2Q8NC56 503 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 C18orf25Q96B23 403 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 MSANTD3Q96H12 275 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 ZFYVE19Q96K21 471 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 SUSD3Q96L08 255 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 LRRC3BQ96PB8 259 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 NACC1Q96RE7 527 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 LRRC3Q9BY71 257 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 CDT1Q9H211 546 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 TMEM60Q9H2L4 133 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 SMOC1Q9H4F8 434 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 C8orf33Q9H7E9 229 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 POLD4Q9HCU8 107 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 TUFT1Q9NNX1 390 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 PCDH12Q9NPG4 1184 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 TOPORSQ9NS56 1045 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 PDRG1Q9NUG6 133 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 SLC38A7Q9NVC3 462 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 DNAAF2Q9NVR5 837 aaKnown RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 GTSE1Q9NYZ3 720 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 ORC3Q9UBD5 711 aaPredicted RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 AFF4Q9UHB7 1163 aaKnown RBP6.39□□□□□ -1.39
VPS33B-207ENST00000557470 TNFSF13BQ9Y275 285 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 YIPF1Q9Y548 306 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 NUB1Q9Y5A7 615 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 PKD1L2Q7Z442 2459 aa6.39□□□□□ -1.39
VPS33B-207ENST00000557470 TRIP11Q15643 1979 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 ARHGEF35A5YM69 484 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 C1QTNF9BB2RNN3 333 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 BTBD18B2RXH4 712 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 PFKFB2O60825 505 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 PRPF40AO75400 957 aaKnown RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 RPP40O75818 363 aaKnown RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 EPN2O95208 641 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 KCNK5O95279 499 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 PROS1P07225 676 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 OR4Q2P0C623 313 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 C1QTNF9P0C862 333 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 FDPSP14324 419 aaKnown RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 CPB1P15086 417 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 KCNE1P15382 129 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 RPL9P32969 192 aaKnown RBP6.38□□□□□ -1.39
VPS33B-207ENST00000557470 MCM4P33991 863 aa6.38□□□□□ -1.39
VPS33B-207ENST00000557470 MCM7P33993 719 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms