RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 ARL6IP4Q66PJ3 421 aaKnown RBP11.03□□□□□ -0.64
RDH11-210ENST00000557331 MAB21L3Q8N8X9 362 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 LEO1Q8WVC0 666 aaPredicted RBP11.03□□□□□ -0.64
RDH11-210ENST00000557331 OSCP1Q8WVF1 389 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 USP13Q92995 863 aaPredicted RBP11.03□□□□□ -0.64
RDH11-210ENST00000557331 CD101Q93033 1021 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 TRMT2BQ96GJ1 504 aaKnown RBP11.03□□□□□ -0.64
RDH11-210ENST00000557331 MYRFLQ96LU7 910 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 AK8Q96MA6 479 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 ZNF560Q96MR9 790 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 EBF3Q9H4W6 596 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 SLC32A1Q9H598 525 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 PARVGQ9HBI0 331 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 HPS4Q9NQG7 708 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 EHD2Q9NZN4 543 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 ATG2BQ96BY7 2078 aa11.03□□□□□ -0.64
RDH11-210ENST00000557331 DSPP15924 2871 aaKnown RBP11.03□□□□□ -0.64
RDH11-210ENST00000557331 H0Y626 953 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 TRIM16O95361 564 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 USP17L7P0C7H9 530 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 PLA2G4BP0C869 781 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 TCF3P15923 654 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 ATF6P18850 670 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 GBP1P32455 592 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 GJA4P35212 333 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 HOXD12P35452 270 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 IFNAR2P48551 515 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 PXNP49023 591 aaPredicted RBP11.02□□□□□ -0.65
RDH11-210ENST00000557331 DGKEP52429 567 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 SLC12A3P55017 1021 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 CYP4F8P98187 520 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 SPAG1Q07617 926 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 DMC1Q14565 340 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 POSTNQ15063 836 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 SV2CQ496J9 727 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 SEZ6Q53EL9 994 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 JADE1Q6IE81 842 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 GPIHBP1Q8IV16 184 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 TSTD1Q8NFU3 115 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 OR10T2Q8NGX3 314 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 LPIN3Q9BQK8 851 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 ACBD6Q9BR61 282 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 ECT2Q9H8V3 914 aa11.02□□□□□ -0.65
RDH11-210ENST00000557331 DUS2Q9NX74 493 aaKnown RBP11.02□□□□□ -0.65
RDH11-210ENST00000557331 EVLQ9UI08 416 aaPredicted RBP11.02□□□□□ -0.65
RDH11-210ENST00000557331 CPSF3Q9UKF6 684 aaKnown RBP11.02□□□□□ -0.65
RDH11-210ENST00000557331 ZNF638Q14966 1978 aaKnown RBP11.02□□□□□ -0.65
RDH11-210ENST00000557331 DMXL2Q8TDJ6 3036 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 TRAV19A0A0A6YYK7 116 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 KPNA7A9QM74 516 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 FAM189A1O60320 539 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 IL18RAPO95256 599 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 NFATC1O95644 943 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 EGFP01133 1207 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 HMGA1P17096 107 aaKnown RBP11.01□□□□□ -0.65
RDH11-210ENST00000557331 ZNF131P52739 623 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 ZNF252P-AS1Q0IIN9 211 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 HNRNPDQ14103 355 aaKnown RBP11.01□□□□□ -0.65
RDH11-210ENST00000557331 MTF1Q14872 753 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 ZRSR1Q15695 479 aaKnown RBP11.01□□□□□ -0.65
RDH11-210ENST00000557331 CCDC6Q16204 474 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 SH3PXD2AQ5TCZ1 1133 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 PMS2CLQ68D20 193 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 CYP2U1Q7Z449 544 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 RABEPKQ7Z6M1 372 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 ABCA7Q8IZY2 2146 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 TMEM86AQ8N2M4 240 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 MYCT1Q8N699 235 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 RPLP0P6Q8NHW5 317 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 CACTINQ8WUQ7 758 aaKnown RBP11.01□□□□□ -0.65
RDH11-210ENST00000557331 FAM212AQ96EL1 285 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 CALML4Q96GE6 196 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 FUBP3Q96I24 572 aaKnown RBP eCLIP11.01□□□□□ -0.65
RDH11-210ENST00000557331 CNOT6LQ96LI5 555 aaKnown RBP11.01□□□□□ -0.65
RDH11-210ENST00000557331 PYM1Q9BRP8 204 aaKnown RBP11.01□□□□□ -0.65
RDH11-210ENST00000557331 MMTAG2Q9BU76 263 aaKnown RBP11.01□□□□□ -0.65
RDH11-210ENST00000557331 NUSAP1Q9BXS6 441 aaKnown RBP11.01□□□□□ -0.65
RDH11-210ENST00000557331 ADAM33Q9BZ11 813 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.01□□□□□ -0.65
RDH11-210ENST00000557331 DPP3Q9NY33 737 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 ABI2Q9NYB9 513 aaPredicted RBP11.01□□□□□ -0.65
RDH11-210ENST00000557331 ZMIZ1Q9ULJ6 1067 aa11.01□□□□□ -0.65
RDH11-210ENST00000557331 ASCC3Q8N3C0 2202 aaKnown RBP11.01□□□□□ -0.65
RDH11-210ENST00000557331 LNP1A1A4G5 178 aa11□□□□□ -0.65
RDH11-210ENST00000557331 UPK3BL1B0FP48 263 aa11□□□□□ -0.65
RDH11-210ENST00000557331 UPK3BL2E5RIL1 263 aa11□□□□□ -0.65
RDH11-210ENST00000557331 SLC9A3R1O14745 358 aaPredicted RBP11□□□□□ -0.65
RDH11-210ENST00000557331 TRAK2O60296 914 aa11□□□□□ -0.65
RDH11-210ENST00000557331 DTNBO60941 627 aa11□□□□□ -0.65
RDH11-210ENST00000557331 PRPF40AO75400 957 aaKnown RBP11□□□□□ -0.65
RDH11-210ENST00000557331 SOAT2O75908 522 aa11□□□□□ -0.65
RDH11-210ENST00000557331 FAM13AO94988 1023 aa11□□□□□ -0.65
RDH11-210ENST00000557331 CKMP06732 381 aa11□□□□□ -0.65
RDH11-210ENST00000557331 PCSK1P29120 753 aa11□□□□□ -0.65
RDH11-210ENST00000557331 TNFSF9P41273 254 aa11□□□□□ -0.65
RDH11-210ENST00000557331 PPP3CCP48454 512 aa11□□□□□ -0.65
RDH11-210ENST00000557331 LHX1P48742 406 aa11□□□□□ -0.65
RDH11-210ENST00000557331 TOB1P50616 345 aaPredicted RBP11□□□□□ -0.65
RDH11-210ENST00000557331 MRPS21P82921 87 aaKnown RBP11□□□□□ -0.65
RDH11-210ENST00000557331 ATP2C1P98194 919 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms