RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 K7EQS6 105 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 TADA3O75528 432 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 AVPR1AP37288 418 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 GPR15P49685 360 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 FAM193AP78312 1265 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 AMPD2Q01433 879 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 GUCY1B3Q02153 619 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 SEMA3BQ13214 749 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 ORC2Q13416 577 aaPredicted RBP13.59□□□□□ -0.23
PSEN1-221ENST00000557293 VEPH1Q14D04 833 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 IL17AQ16552 155 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 GAB4Q2WGN9 574 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 EML3Q32P44 896 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 USP39Q53GS9 565 aaKnown RBP13.59□□□□□ -0.23
PSEN1-221ENST00000557293 CYP2U1Q7Z449 544 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 FRMD1Q8N878 549 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 STKLD1Q8NE28 680 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 PIGKQ92643 395 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 ACDQ96AP0 544 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 DRC1Q96MC2 740 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 CYP2S1Q96SQ9 504 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 KIF9Q9HAQ2 790 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 TMLHEQ9NVH6 421 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 DNM3Q9UQ16 869 aa13.59□□□□□ -0.23
PSEN1-221ENST00000557293 ADAMTS20P59510 1910 aa13.58□□□□□ -0.23
PSEN1-221ENST00000557293 UPK3BL1B0FP48 263 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 UPK3BL2E5RIL1 263 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 ODC1P11926 461 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 PLS3P13797 630 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 GUCY2CP25092 1073 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 DDX6P26196 483 aaKnown RBP eCLIP13.58□□□□□ -0.24
PSEN1-221ENST00000557293 CDC25AP30304 524 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 OPRD1P41143 372 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 DHPSP49366 369 aaPredicted RBP13.58□□□□□ -0.24
PSEN1-221ENST00000557293 BFSP1Q12934 665 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 NBR1Q14596 966 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 ZNF77Q15935 545 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 C9orf57Q5W0N0 161 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 JADE1Q6IE81 842 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 TMEM92Q6UXU6 159 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 TSTD1Q8NFU3 115 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 SNX29Q8TEQ0 813 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 LRRC15Q8TF66 581 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 OSCP1Q8WVF1 389 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 CNOT6LQ96LI5 555 aaKnown RBP13.58□□□□□ -0.24
PSEN1-221ENST00000557293 GCNAQ96QF7 691 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 FNBP1Q96RU3 617 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 TSPAN18Q96SJ8 248 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 MBD1Q9UIS9 605 aaPredicted RBP13.58□□□□□ -0.24
PSEN1-221ENST00000557293 GPSM3Q9Y4H4 160 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 WNT6Q9Y6F9 365 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 GON4LQ3T8J9 2241 aa13.58□□□□□ -0.24
PSEN1-221ENST00000557293 OBSL1O75147 1896 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 PAX3P23760 479 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 P2RY2P41231 377 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 PTGER3P43115 390 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 PPP2R3AQ06190 1150 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 RAD51AP2Q09MP3 1159 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 STRN3Q13033 797 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 PSMD2Q13200 908 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 MTF1Q14872 753 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 TRIM61Q5EBN2 209 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 TTC38Q5R3I4 469 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 SDHAF4Q5VUM1 108 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 WSCD1Q658N2 575 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 CC2D1AQ6P1N0 951 aaPredicted RBP13.57□□□□□ -0.24
PSEN1-221ENST00000557293 C19orf48Q6RUI8 117 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 C11orf74Q86VG3 221 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 PROSER1Q86XN7 944 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 CHCHD4Q8N4Q1 142 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 CPA6Q8N4T0 437 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 MDGA1Q8NFP4 955 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 C2orf15Q8WU43 125 aaKnown RBP13.57□□□□□ -0.24
PSEN1-221ENST00000557293 RLN3Q8WXF3 142 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 KCNN1Q92952 543 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 DUS2Q9NX74 493 aaKnown RBP13.57□□□□□ -0.24
PSEN1-221ENST00000557293 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.57□□□□□ -0.24
PSEN1-221ENST00000557293 ZNF638Q14966 1978 aaKnown RBP13.57□□□□□ -0.24
PSEN1-221ENST00000557293 SCN1AP35498 2009 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 TSC2P49815 1807 aa13.57□□□□□ -0.24
PSEN1-221ENST00000557293 TNRC6BQ9UPQ9 1833 aaKnown RBP13.56□□□□□ -0.24
PSEN1-221ENST00000557293 CYB561D2O14569 222 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 TNFRSF10BO14763 440 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 ENGP17813 658 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 TOB1P50616 345 aaPredicted RBP13.56□□□□□ -0.24
PSEN1-221ENST00000557293 SIM1P81133 766 aaPredicted RBP13.56□□□□□ -0.24
PSEN1-221ENST00000557293 ZXDBP98169 803 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 FAM160A1Q05DH4 1040 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 MESP2Q0VG99 397 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 SMARCB1Q12824 385 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 USP4Q13107 963 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 TRIM29Q14134 588 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 TAF12Q16514 161 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 CRY1Q16526 586 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 C2orf27AQ580R0 203 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 ANO7Q6IWH7 933 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 SLC39A4Q6P5W5 647 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 SLC23A3Q6PIS1 610 aa13.56□□□□□ -0.24
PSEN1-221ENST00000557293 SFTPA1Q8IWL2 248 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms