RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 TFIP11Q9UBB9 837 aaKnown RBP17.09■□□□□ 0.33
TUBB3-213ENST00000557262 L1RE1Q9UN81 338 aa17.09■□□□□ 0.33
TUBB3-213ENST00000557262 SOBPA7XYQ1 873 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 SPTLC2O15270 562 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 PPP6R2O75170 966 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 PRAMEF12O95522 483 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 KRT19P08727 400 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 CSH1P0DML2 217 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 CSH2P0DML3 217 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 DDX6P26196 483 aaKnown RBP eCLIP17.08■□□□□ 0.32
TUBB3-213ENST00000557262 CTHP32929 405 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 NLRP12P59046 1061 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 MYL7Q01449 175 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 BFSP1Q12934 665 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 GAS6Q14393 721 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 SCARA3Q6AZY7 606 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 TMEM150AQ86TG1 271 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 MAB21L3Q8N8X9 362 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 SPATA18Q8TC71 538 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 LEO1Q8WVC0 666 aaPredicted RBP17.08■□□□□ 0.32
TUBB3-213ENST00000557262 ZNF396Q96N95 335 aaPredicted RBP17.08■□□□□ 0.32
TUBB3-213ENST00000557262 TNMDQ9H2S6 317 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 CUEDC2Q9H467 287 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 GKN1Q9NS71 199 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 SMG5Q9UPR3 1016 aaKnown RBP17.08■□□□□ 0.32
TUBB3-213ENST00000557262 R3HCC1Q9Y3T6 440 aaKnown RBP17.08■□□□□ 0.32
TUBB3-213ENST00000557262 SNX9Q9Y5X1 595 aa17.08■□□□□ 0.32
TUBB3-213ENST00000557262 TSC2P49815 1807 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 ZNF233A6NK53 670 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 TMEM191BP0C7N4 346 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 AVPR1AP37288 418 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 LHX1P48742 406 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 RPL10AP62906 217 aaKnown RBP17.07■□□□□ 0.32
TUBB3-213ENST00000557262 AMPD3Q01432 767 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 SATB1Q01826 763 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 PUM1Q14671 1186 aaKnown RBP eCLIP17.07■□□□□ 0.32
TUBB3-213ENST00000557262 SURF1Q15526 300 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 ITPRIPL2Q3MIP1 535 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 INTS6LQ5JSJ4 861 aaKnown RBP17.07■□□□□ 0.32
TUBB3-213ENST00000557262 TXNDC11Q6PKC3 985 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 DPH6Q7L8W6 267 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 TOP6BLQ8N6T0 577 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 ANKRD36BP1Q96IX9 119 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 SMG9Q9H0W8 520 aaKnown RBP17.07■□□□□ 0.32
TUBB3-213ENST00000557262 ABCB6Q9NP58 842 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 RBM12Q9NTZ6 932 aaKnown RBP17.07■□□□□ 0.32
TUBB3-213ENST00000557262 INTS13Q9NVM9 706 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 KBTBD4Q9NVX7 518 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 SIX4Q9UIU6 781 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 GTF3C4Q9UKN8 822 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 MAGED2Q9UNF1 606 aaPredicted RBP17.07■□□□□ 0.32
TUBB3-213ENST00000557262 TCHHQ07283 1943 aa17.07■□□□□ 0.32
TUBB3-213ENST00000557262 GABRDO14764 452 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 ACAT1P24752 427 aaKnown RBP17.06■□□□□ 0.32
TUBB3-213ENST00000557262 CYP2F1P24903 491 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 GPR15P49685 360 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 TNK2Q07912 1038 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 MYO1EQ12965 1108 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 PON2Q15165 354 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 E2F4Q16254 413 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 DDR2Q16832 855 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 WDR44Q5JSH3 913 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 TXNDC8Q6A555 127 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 MON1AQ86VX9 555 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 SYNPOQ8N3V7 929 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 MRPS31Q92665 395 aaKnown RBP17.06■□□□□ 0.32
TUBB3-213ENST00000557262 FAM84AQ96KN4 292 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 PKMYT1Q99640 499 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 FAM83CQ9BQN1 747 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 TRIM9Q9C026 710 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 MTMR12Q9C0I1 747 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 KIAA1586Q9HCI6 787 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 TDP1Q9NUW8 608 aa17.06■□□□□ 0.32
TUBB3-213ENST00000557262 UXTQ9UBK9 157 aaPredicted RBP17.06■□□□□ 0.32
TUBB3-213ENST00000557262 PAPSS2O95340 614 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-213ENST00000557262 PCSK1P29120 753 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 DUOXA2Q1HG44 320 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 SOWAHAQ2M3V2 549 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 SDHAF4Q5VUM1 108 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 LMBRD2Q68DH5 695 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-213ENST00000557262 DGLUCYQ7Z3D6 616 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 OSTM1Q86WC4 334 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 SPATA2LQ8IUW3 424 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-213ENST00000557262 ADGRF2Q8IZF7 708 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 IQUBQ8NA54 791 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 GLIS3Q8NEA6 775 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 ZNF507Q8TCN5 953 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 USP13Q92995 863 aaPredicted RBP17.05■□□□□ 0.32
TUBB3-213ENST00000557262 HPS3Q969F9 1004 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 KIF9Q9HAQ2 790 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 DLL3Q9NYJ7 618 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 RAB23Q9ULC3 237 aa17.05■□□□□ 0.32
TUBB3-213ENST00000557262 NUP210Q8TEM1 1887 aaPredicted RBP17.04■□□□□ 0.32
TUBB3-213ENST00000557262 EIF3DO15371 548 aaKnown RBP eCLIP17.04■□□□□ 0.32
TUBB3-213ENST00000557262 CUTAO60888 179 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 NOL4O94818 638 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 YEATS4O95619 227 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 TNNC2P02585 160 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 HOXD13P35453 343 aa17.04■□□□□ 0.32
TUBB3-213ENST00000557262 RUNX3Q13761 415 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms