RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 TASP1Q9H6P5 420 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 MMP17Q9ULZ9 603 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 TBX20Q9UMR3 447 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 ASB3Q9Y575 518 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 PCDHGB2Q9Y5G2 931 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 ASCC3Q8N3C0 2202 aaKnown RBP6.33□□□□□ -1.4
ATXN3-245ENST00000556958 IGLV3-22A0A075B6J6 115 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 INO80B-WBP1J3KQ70 363 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 FLRT2O43155 660 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 TSPAN1O60635 241 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 DKC1O60832 514 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-245ENST00000556958 DDAH1O94760 285 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 AFPP02771 609 aaKnown RBP6.32□□□□□ -1.4
ATXN3-245ENST00000556958 TKTP29401 623 aaKnown RBP6.32□□□□□ -1.4
ATXN3-245ENST00000556958 NAPAP54920 295 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 MRPS21P82921 87 aaKnown RBP6.32□□□□□ -1.4
ATXN3-245ENST00000556958 POU5F1BQ06416 359 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 CCDC173Q0VFZ6 552 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 TFDP1Q14186 410 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 MXD4Q14582 209 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-245ENST00000556958 RTP5Q14D33 572 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 MAP7D1Q3KQU3 841 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 HSF5Q4G112 596 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-245ENST00000556958 PRR16Q569H4 304 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 ARHGAP40Q5TG30 622 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 IL27RAQ6UWB1 636 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 XKR5Q6UX68 686 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 CYB5R4Q7L1T6 521 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 BPHLQ86WA6 291 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-245ENST00000556958 SPACA3Q8IXA5 215 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 RGL4Q8IZJ4 473 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 TMTC2Q8N394 836 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 CPA6Q8N4T0 437 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 SRBD1Q8N5C6 995 aaKnown RBP6.32□□□□□ -1.4
ATXN3-245ENST00000556958 FOXJ1Q92949 421 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 LIN37Q96GY3 246 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-245ENST00000556958 CPB2Q96IY4 423 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 PGBD1Q96JS3 809 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 CDK15Q96Q40 435 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 GCNAQ96QF7 691 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 RIT2Q99578 217 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 CACNG4Q9UBN1 327 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 MYH15Q9Y2K3 1946 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 COL6A6A6NMZ7 2263 aa6.32□□□□□ -1.4
ATXN3-245ENST00000556958 A0A1B0GUA9 196 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 SMCO2A6NFE2 343 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 SYN3O14994 580 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 MARCH6O60337 910 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 GAS7O60861 476 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 ZNF217O75362 1048 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 NPTXRO95502 500 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 CER1O95813 267 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 PRKCBP05771 671 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 CALM1P0DP23 149 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 CALM2P0DP24 149 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 CALM3P0DP25 149 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 CR2P20023 1033 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 CDC25CP30307 473 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 GJA4P35212 333 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 SOX11P35716 441 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 AVPR1AP37288 418 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 PTENP60484 403 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 SCRN1Q12765 414 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 BFSP1Q12934 665 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 UGCGQ16739 394 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 CTXN3Q4LDR2 81 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 WDR45BQ5MNZ6 344 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 EOGTQ5NDL2 527 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 STXBP5Q5T5C0 1151 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 DBX2Q6ZNG2 339 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 MIER3Q7Z3K6 550 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 RALYLQ86SE5 291 aaKnown RBP6.31□□□□□ -1.4
ATXN3-245ENST00000556958 ITIH5Q86UX2 942 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 CCDC33Q8N5R6 958 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 ZNF248Q8NDW4 579 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 TMEM143Q96AN5 459 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 LGMNQ99538 433 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 SH2D3AQ9BRG2 576 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 TEKT3Q9BXF9 490 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 LRRC3Q9BY71 257 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 OXCT2Q9BYC2 517 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-245ENST00000556958 TRIM4Q9C037 500 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 ECT2Q9H8V3 914 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 KIF9Q9HAQ2 790 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 HPS4Q9NQG7 708 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 TM7SF3Q9NS93 570 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 FBXL5Q9UKA1 691 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 COL12A1Q99715 3063 aa6.31□□□□□ -1.4
ATXN3-245ENST00000556958 CNTNAP5Q8WYK1 1306 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 OTOL1A6NHN0 477 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-245ENST00000556958 hCG_1984214I3L0E3 225 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 PTGESO14684 152 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 CHMP2AO43633 222 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 PRAMEF12O95522 483 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 CELA2BP08218 269 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-245ENST00000556958 CPB1P15086 417 aa6.3□□□□□ -1.4
ATXN3-245ENST00000556958 ARF4P18085 180 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-245ENST00000556958 GABRR2P28476 465 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms