RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 RIPK2O43353 540 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 MED7O43513 233 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 IVLP07476 585 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 ZSCAN5DPP0CG00 497 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 ATF2P15336 505 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 GBP1P32455 592 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 LSP1P33241 339 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 SLCO1A2P46721 670 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 CCT5P48643 541 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 NDST1P52848 882 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 SLC25A11Q02978 314 aaKnown RBP10.69□□□□□ -0.7
TMEM260-211ENST00000556648 CALCOCO2Q13137 446 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 CCL14Q16627 93 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 OLFML2BQ68BL8 750 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 MAIP1Q8WWC4 291 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 TLCD1Q96CP7 247 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 SNF8Q96H20 258 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 ZMAT2Q96NC0 199 aaKnown RBP10.69□□□□□ -0.7
TMEM260-211ENST00000556648 ACAP3Q96P50 834 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 CDC42EP4Q9H3Q1 356 aaKnown RBP10.69□□□□□ -0.7
TMEM260-211ENST00000556648 ABHD16BQ9H3Z7 469 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 ASB7Q9H672 318 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 ZWILCHQ9H900 591 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 RRAGCQ9HB90 399 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 SNTG2Q9NY99 539 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 TUBGCP4Q9UGJ1 667 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 RSPH14Q9UHP6 348 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 SLC12A6Q9UHW9 1150 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 DNPEPQ9ULA0 475 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 NME7Q9Y5B8 376 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 SCN1AP35498 2009 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 DOCK3Q8IZD9 2030 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 KAT6AQ92794 2004 aa10.69□□□□□ -0.7
TMEM260-211ENST00000556648 hCG_1818297A0A087WSY0 165 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 TLDC2A0PJX2 215 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 LRRD1A4D1F6 860 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 SLC15A5A6NIM6 579 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 C3orf70A6NLC5 250 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 IGF2BP3O00425 579 aaKnown RBP eCLIP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 LIASO43766 372 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 GPR32O75388 356 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 ETS1P14921 441 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 MDH1P40925 334 aaKnown RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 GRM5P41594 1212 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 SEC24CP53992 1094 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 IFI35P80217 286 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 ZNF200P98182 395 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 CCNG2Q16589 344 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 PTGISQ16647 500 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 GLRA4Q5JXX5 417 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 IQSEC1Q6DN90 963 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 TRNP1Q6NT89 227 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 RCOR2Q8IZ40 523 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 NIPA2Q8N8Q9 360 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 C2orf69Q8N8R5 385 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 ATL2Q8NHH9 583 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 BCAS4Q8TDM0 211 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 C18orf25Q96B23 403 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 PIWIL1Q96J94 861 aaKnown RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 HEXIM2Q96MH2 286 aaKnown RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 LPIN3Q9BQK8 851 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 VRTNQ9H8Y1 702 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 ITGA11Q9UKX5 1188 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 SIGLEC16A6NMB1 481 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 ANKRD65E5RJM6 399 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 HCRTO43612 131 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 LRCH4O75427 683 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 ACSL3O95573 720 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 GAS8O95995 478 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 PFKMP08237 780 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 KRT3P12035 628 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 RARGP13631 454 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 KLRC2P26717 231 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 ATICP31939 592 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 ADCY8P40145 1251 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 CDKN2BP42772 138 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 EIF3BP55884 814 aaKnown RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 PPP2R2AP63151 447 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 FKBP1BP68106 108 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 RBP5P82980 135 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 TAP1Q03518 808 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 PDE4CQ08493 712 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 PIGHQ14442 188 aaPredicted RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 TAF5Q15542 800 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 KCNT1Q5JUK3 1230 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 MORN1Q5T089 497 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 IZUMO3Q5VZ72 239 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 CST9Q5W186 159 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 TLK2Q86UE8 772 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 ZNF410Q86VK4 478 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 GRK7Q8WTQ7 553 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 RBM41Q96IZ5 413 aaKnown RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 MRPL45Q9BRJ2 306 aaKnown RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 APOL6Q9BWW8 343 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 NXF3Q9H4D5 531 aaKnown RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 SYNCQ9H7C4 482 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 C10orf88Q9H8K7 445 aa10.68□□□□□ -0.7
TMEM260-211ENST00000556648 GNEQ9Y223 722 aaKnown RBP10.68□□□□□ -0.7
TMEM260-211ENST00000556648 TULP2O00295 520 aa10.67□□□□□ -0.7
TMEM260-211ENST00000556648 F2P00734 622 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms