RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 DUSP9Q99956 384 aaKnown RBP10.93□□□□□ -0.66
SCFD1-220ENST00000556486 NTPCRQ9BSD7 190 aaKnown RBP10.93□□□□□ -0.66
SCFD1-220ENST00000556486 KIFC3Q9BVG8 833 aa10.93□□□□□ -0.66
SCFD1-220ENST00000556486 ETNK1Q9HBU6 452 aa10.93□□□□□ -0.66
SCFD1-220ENST00000556486 POLD4Q9HCU8 107 aa10.93□□□□□ -0.66
SCFD1-220ENST00000556486 TOPORSQ9NS56 1045 aaPredicted RBP10.93□□□□□ -0.66
SCFD1-220ENST00000556486 CEP72Q9P209 647 aa10.93□□□□□ -0.66
SCFD1-220ENST00000556486 ARHGAP28Q9P2N2 729 aa10.93□□□□□ -0.66
SCFD1-220ENST00000556486 LRWD1Q9UFC0 647 aa10.93□□□□□ -0.66
SCFD1-220ENST00000556486 INSL5Q9Y5Q6 135 aa10.93□□□□□ -0.66
SCFD1-220ENST00000556486 FASNP49327 2511 aaKnown RBP10.92□□□□□ -0.66
SCFD1-220ENST00000556486 ITPR1Q14643 2758 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 SMIM28A0A1B0GU29 152 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 ARHGEF37A1IGU5 675 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 K7ERI5 159 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 ARNTLO00327 626 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 ABLIM1O14639 778 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 ABLIM3O94929 683 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 ZNF806P0C7X5 589 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 CCDC192P0DO97 292 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 KCNE1P15382 129 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 CCT6AP40227 531 aaKnown RBP10.92□□□□□ -0.66
SCFD1-220ENST00000556486 PRPHP41219 470 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 SLC19A1P41440 591 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 NPTX2P47972 431 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 SOX4Q06945 474 aaPredicted RBP10.92□□□□□ -0.66
SCFD1-220ENST00000556486 ZNF252P-AS1Q0IIN9 211 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 TWF1Q12792 350 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 LRRC32Q14392 662 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 COX20Q5RI15 118 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 RNF43Q68DV7 783 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 KIAA1211LQ6NV74 962 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 YAF2Q8IY57 180 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 ZNF461Q8TAF7 563 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 ZSCAN31Q96LW9 406 aaPredicted RBP10.92□□□□□ -0.66
SCFD1-220ENST00000556486 ACO2Q99798 780 aaKnown RBP10.92□□□□□ -0.66
SCFD1-220ENST00000556486 TIPINQ9BVW5 301 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 RAB34Q9BZG1 259 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 CDT1Q9H211 546 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 CYLDQ9NQC7 956 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 TMPRSS4Q9NRS4 437 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 SLC38A7Q9NVC3 462 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 GTSE1Q9NYZ3 720 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 NOL7Q9UMY1 257 aaKnown RBP10.92□□□□□ -0.66
SCFD1-220ENST00000556486 DMXL2Q8TDJ6 3036 aa10.92□□□□□ -0.66
SCFD1-220ENST00000556486 SPECC1L-ADORA2AF8WAN1 911 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 TNFRSF10BO14763 440 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 SYN3O14994 580 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 RPP40O75818 363 aaKnown RBP10.91□□□□□ -0.66
SCFD1-220ENST00000556486 MICAL2O94851 1124 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 EPN2O95208 641 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 MCF2P10911 925 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 RPL9P32969 192 aaKnown RBP10.91□□□□□ -0.66
SCFD1-220ENST00000556486 CNR2P34972 360 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 MPLP40238 635 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 TOB1P50616 345 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-220ENST00000556486 LIMK1P53667 647 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 OSTNP61366 133 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 TNK2Q07912 1038 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 MAPK7Q13164 816 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 CYP4A22Q5TCH4 519 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 LIAT1Q6ZQX7 453 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 WDR5BQ86VZ2 330 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 MFSD6LQ8IWD5 586 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 CCDC83Q8IWF9 413 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 SHKBP1Q8TBC3 707 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 LRRC3BQ96PB8 259 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 FAM129BQ96TA1 746 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 KIF2CQ99661 725 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 IER2Q9BTL4 223 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 C2orf49Q9BVC5 232 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-220ENST00000556486 CCDC94Q9BW85 323 aaPredicted RBP10.91□□□□□ -0.66
SCFD1-220ENST00000556486 LSM14BQ9BX40 385 aaKnown RBP10.91□□□□□ -0.66
SCFD1-220ENST00000556486 MRPL4Q9BYD3 311 aaKnown RBP10.91□□□□□ -0.66
SCFD1-220ENST00000556486 DDX19AQ9NUU7 478 aaKnown RBP10.91□□□□□ -0.66
SCFD1-220ENST00000556486 CNTN3Q9P232 1028 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 KCNG1Q9UIX4 513 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 MAFFQ9ULX9 164 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 DNM3Q9UQ16 869 aa10.91□□□□□ -0.66
SCFD1-220ENST00000556486 PKD1L2Q7Z442 2459 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 SRRM3A6NNA2 597 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-220ENST00000556486 C4orf47A7E2U8 309 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 ZNF197O14709 1029 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 DCLK1O15075 740 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 ZBTB24O43167 697 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-220ENST00000556486 ZIC2O95409 532 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-220ENST00000556486 ATF2P15336 505 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 GUCY2CP25092 1073 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 YARSP54577 528 aaKnown RBP10.9□□□□□ -0.66
SCFD1-220ENST00000556486 PEX3P56589 373 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 RING1Q06587 406 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 RAD51AP2Q09MP3 1159 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 DMP1Q13316 513 aaPredicted RBP10.9□□□□□ -0.66
SCFD1-220ENST00000556486 ZNF568Q3ZCX4 644 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 PLA2G2CQ5R387 149 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 HYIQ5T013 277 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 C1orf186Q6ZWK4 172 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 SLC9A9Q8IVB4 645 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 TCEAL8Q8IYN2 117 aa10.9□□□□□ -0.66
SCFD1-220ENST00000556486 ELMOD1Q8N336 334 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms