RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 PRSS36Q5K4E3 855 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 MTSS1LQ765P7 747 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 PDZD4Q76G19 769 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-205ENST00000556310 LRRTM3Q86VH5 581 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 FAM186BQ8IYM0 893 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 KBTBD7Q8WVZ9 684 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 PKMYT1Q99640 499 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 SEPT5Q99719 369 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-205ENST00000556310 MKNK1Q9BUB5 465 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 XYLT2Q9H1B5 865 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 VRTNQ9H8Y1 702 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 ASAH2Q9NR71 780 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 ABI2Q9NYB9 513 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-205ENST00000556310 DUSP12Q9UNI6 340 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 SLC27A5Q9Y2P5 690 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 ASB3Q9Y575 518 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 PCDHB5Q9Y5E4 795 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 DENND4CQ5VZ89 1909 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 KMT2EQ8IZD2 1858 aa12.36□□□□□ -0.43
SLIRP-205ENST00000556310 NUP210Q8TEM1 1887 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-205ENST00000556310 IKBKBO14920 756 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 TACC1O75410 805 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 SOAT2O75908 522 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 C4BPAP04003 597 aaKnown RBP12.35□□□□□ -0.43
SLIRP-205ENST00000556310 HAPLN1P10915 354 aaPredicted RBP12.35□□□□□ -0.43
SLIRP-205ENST00000556310 KRT13P13646 458 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 CEBPBP17676 345 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 WARSP23381 471 aaKnown RBP12.35□□□□□ -0.43
SLIRP-205ENST00000556310 ACAT1P24752 427 aaKnown RBP12.35□□□□□ -0.43
SLIRP-205ENST00000556310 PSMC2P35998 433 aaKnown RBP12.35□□□□□ -0.43
SLIRP-205ENST00000556310 PPP1R2P41236 205 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 VAMP7P51809 220 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 ADAM9Q13443 819 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 STIM1Q13586 685 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 NCOA4Q13772 614 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 VEPH1Q14D04 833 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 ZNF699Q32M78 642 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 WDR72Q3MJ13 1102 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 MGAT5BQ3V5L5 792 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 C1orf220Q5T0J3 134 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 CYP4A22Q5TCH4 519 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 BMP8AQ7Z5Y6 402 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 ITIH5Q86UX2 942 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 TMC8Q8IU68 726 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 ZC3H3Q8IXZ2 948 aaKnown RBP12.35□□□□□ -0.43
SLIRP-205ENST00000556310 ADSSL1Q8N142 457 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 ING5Q8WYH8 240 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 PSMG2Q969U7 264 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 MARVELD3Q96A59 401 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 ASIC4Q96FT7 647 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 MMS19Q96T76 1030 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 TSG101Q99816 390 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 SYT15Q9BQS2 421 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 SMOC2Q9H3U7 446 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 SLC24A3Q9HC58 644 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 ABCB6Q9NP58 842 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 TMLHEQ9NVH6 421 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 GDE1Q9NZC3 331 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 MAN1B1Q9UKM7 699 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 CDH9Q9ULB4 789 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 NUMBLQ9Y6R0 609 aa12.35□□□□□ -0.43
SLIRP-205ENST00000556310 PSMA7O14818 248 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 CETN3O15182 167 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 HCRTO43612 131 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 VNN1O95497 513 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 FAM163BP0C2L3 166 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 TRIM49P0CI25 452 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 TRIM49CP0CI26 452 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 EPB41P11171 864 aaKnown RBP12.34□□□□□ -0.43
SLIRP-205ENST00000556310 ATF6P18850 670 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 CCR2P41597 374 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 EMP3P54852 163 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 LRRC63Q05C16 580 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 CFAP221Q4G0U5 840 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 C6orf132Q5T0Z8 1188 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 HFE2Q6ZVN8 426 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 SV2AQ7L0J3 742 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 RSAD2Q8WXG1 361 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 FGF14Q92915 247 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 TCEAL4Q96EI5 215 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 FUBP3Q96I24 572 aaKnown RBP eCLIP12.34□□□□□ -0.43
SLIRP-205ENST00000556310 LRRC3Q9BY71 257 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 GREB1Q4ZG55 1949 aa12.34□□□□□ -0.43
SLIRP-205ENST00000556310 SLC16A3O15427 465 aaKnown RBP12.33□□□□□ -0.44
SLIRP-205ENST00000556310 MOSPD3O75425 235 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 CLSTN1O94985 981 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 FGF19O95750 216 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 ASS1P00966 412 aaKnown RBP12.33□□□□□ -0.44
SLIRP-205ENST00000556310 SRFP11831 508 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 MYL4P12829 197 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 CCNE1P24864 410 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 PIK3CAP42336 1068 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 MCCD1P59942 119 aaPredicted RBP12.33□□□□□ -0.44
SLIRP-205ENST00000556310 PSMC1P62191 440 aaKnown RBP12.33□□□□□ -0.44
SLIRP-205ENST00000556310 FKBP3Q00688 224 aaKnown RBP12.33□□□□□ -0.44
SLIRP-205ENST00000556310 MAPRE1Q15691 268 aaKnown RBP12.33□□□□□ -0.44
SLIRP-205ENST00000556310 CCDC142Q17RM4 750 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 ZNF667Q5HYK9 610 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 FAM171BQ6P995 826 aa12.33□□□□□ -0.44
SLIRP-205ENST00000556310 PARM1Q6UWI2 310 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms