RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 RPS6KA5O75582 802 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 PEX5P50542 639 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 CENPCQ03188 943 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 AUHQ13825 339 aaKnown RBP15.6■□□□□ 0.09
NEK9-209ENST00000556170 TFDP3Q5H9I0 405 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 SPATA21Q7Z572 469 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 TTC13Q8NBP0 860 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 NINJ2Q9NZG7 142 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 XPO7Q9UIA9 1087 aaKnown RBP15.6■□□□□ 0.09
NEK9-209ENST00000556170 A0A0B4J269 797 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 I3L4J1 428 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 ROR1Q01973 937 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 ERO1BQ86YB8 467 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 ST6GALNAC4Q9H4F1 302 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 NOD1Q9Y239 953 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 SMCHD1A6NHR9 2005 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 CCT8L1PA6NM43 557 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 CREB3O43889 395 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 RGS20O76081 388 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 C4BPAP04003 597 aaKnown RBP15.59■□□□□ 0.09
NEK9-209ENST00000556170 SSTR1P30872 391 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 TNFAIP2Q03169 654 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
NEK9-209ENST00000556170 TFDP2Q14188 446 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 PLCB4Q15147 1175 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 SYDE1Q6ZW31 735 aaPredicted RBP15.59■□□□□ 0.09
NEK9-209ENST00000556170 TRPM8Q7Z2W7 1104 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 VPS33BQ9H267 617 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 ETNK1Q9HBU6 452 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 LRRC4Q9HBW1 653 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 AVENQ9NQS1 362 aaPredicted RBP15.59■□□□□ 0.09
NEK9-209ENST00000556170 RPTORQ8N122 1335 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 FSCN2O14926 492 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 FARP2O94887 1054 aaPredicted RBP15.59■□□□□ 0.09
NEK9-209ENST00000556170 NPTXRO95502 500 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 RCN2Q14257 317 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 TWF2Q6IBS0 349 aaKnown RBP15.59■□□□□ 0.09
NEK9-209ENST00000556170 MICAL1Q8TDZ2 1067 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 OPTNQ96CV9 577 aa15.59■□□□□ 0.09
NEK9-209ENST00000556170 ROPN1BQ9BZX4 212 aaPredicted RBP15.59■□□□□ 0.09
NEK9-209ENST00000556170 ROPN1Q9HAT0 212 aaPredicted RBP15.59■□□□□ 0.09
NEK9-209ENST00000556170 USP15Q9Y4E8 981 aaPredicted RBP15.59■□□□□ 0.09
NEK9-209ENST00000556170 H0Y3Z8 333 aa15.58■□□□□ 0.09
NEK9-209ENST00000556170 KIF1CO43896 1103 aaKnown RBP15.58■□□□□ 0.09
NEK9-209ENST00000556170 PDE1BQ01064 536 aa15.58■□□□□ 0.09
NEK9-209ENST00000556170 SATB1Q01826 763 aa15.58■□□□□ 0.09
NEK9-209ENST00000556170 NTPCRQ9BSD7 190 aaKnown RBP15.58■□□□□ 0.09
NEK9-209ENST00000556170 SMYD3Q9H7B4 428 aa15.58■□□□□ 0.09
NEK9-209ENST00000556170 HES2Q9Y543 173 aa15.58■□□□□ 0.09
NEK9-209ENST00000556170 GRIN2DO15399 1336 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 FAM47DPA6NHR8 397 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 ASB14A6NK59 587 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 EIF4E1BA6NMX2 242 aaKnown RBP15.58■□□□□ 0.08
NEK9-209ENST00000556170 TTLL13PA6NNM8 815 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 LACTBL1A8MY62 500 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 STK10O94804 968 aaKnown RBP15.58■□□□□ 0.08
NEK9-209ENST00000556170 NFICP08651 508 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 KITP10721 976 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 PTPN11Q06124 597 aaPredicted RBP15.58■□□□□ 0.08
NEK9-209ENST00000556170 FASTKD5Q7L8L6 764 aaKnown RBP15.58■□□□□ 0.08
NEK9-209ENST00000556170 EIF1ADQ8N9N8 165 aaKnown RBP15.58■□□□□ 0.08
NEK9-209ENST00000556170 ATP11CQ8NB49 1132 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 SERPINB12Q96P63 405 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 CD248Q9HCU0 757 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 SLC40A1Q9NP59 571 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 PRMT7Q9NVM4 692 aaPredicted RBP15.58■□□□□ 0.08
NEK9-209ENST00000556170 GRHL1Q9NZI5 618 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 PNMA3Q9UL41 463 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 PIN4Q9Y237 131 aaKnown RBP15.58■□□□□ 0.08
NEK9-209ENST00000556170 ECM29Q5VYK3 1845 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 CCDC195A0A1B0GUA6 201 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 SLC25A27O95847 323 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 ARL4AP40617 200 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 RBP5P82980 135 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 NME3Q13232 169 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 LRRC19Q9H756 370 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 ECT2Q9H8V3 914 aa15.58■□□□□ 0.08
NEK9-209ENST00000556170 PTPRJQ12913 1337 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 MROH7Q68CQ1 1323 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 RARBP10826 455 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 TCF4P15884 667 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 KRT4P19013 534 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 OVGP1Q12889 678 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 ZPBP2Q6X784 338 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 TTC25Q96NG3 672 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 NT5C1AQ9BXI3 368 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 AFG3L2Q9Y4W6 797 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 SHOX2O60902 331 aaPredicted RBP15.57■□□□□ 0.08
NEK9-209ENST00000556170 TGFB3P10600 412 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 PTGIRP43119 386 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 WNT7BP56706 349 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 ZRSR2Q15696 482 aaKnown RBP15.57■□□□□ 0.08
NEK9-209ENST00000556170 TRIM68Q6AZZ1 485 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 JADE1Q6IE81 842 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 KCNV1Q6PIU1 500 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 ZDHHC24Q6UX98 284 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 EXOC3L1Q86VI1 746 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 REPS2Q8NFH8 660 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 MAML1Q92585 1016 aa15.57■□□□□ 0.08
NEK9-209ENST00000556170 PGM2Q96G03 612 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms