RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 TMEM86AQ8N2M4 240 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 INTS4Q96HW7 963 aaKnown RBP20.25■□□□□ 0.83
CDKN3-209ENST00000556102 ACBD6Q9BR61 282 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 CBWD1Q9BRT8 395 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 PI4K2AQ9BTU6 479 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 FGFBP2Q9BYJ0 223 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 SMG9Q9H0W8 520 aaKnown RBP20.25■□□□□ 0.83
CDKN3-209ENST00000556102 TMEM206Q9H813 350 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 PANK4Q9NVE7 773 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 ITGA11Q9UKX5 1188 aa20.25■□□□□ 0.83
CDKN3-209ENST00000556102 MED19A0JLT2 244 aaPredicted RBP20.24■□□□□ 0.83
CDKN3-209ENST00000556102 GOLGA8IPA6NC78 632 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 GOLGA8JA6NMD2 632 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 PRPF40AO75400 957 aaKnown RBP20.24■□□□□ 0.83
CDKN3-209ENST00000556102 TGM1P22735 817 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 AVPR1AP37288 418 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 MYL7Q01449 175 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 LMNB2Q03252 620 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 BFSP1Q12934 665 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 CCINQ13939 588 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 LAIR1Q6GTX8 287 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 SYNPOQ8N3V7 929 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 CSGALNACT2Q8N6G5 542 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 CXorf38Q8TB03 319 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 SPATA18Q8TC71 538 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 PANK2Q9BZ23 570 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 ABCB6Q9NP58 842 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 GDAP2Q9NXN4 497 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 DDX43Q9NXZ2 648 aaKnown RBP20.24■□□□□ 0.83
CDKN3-209ENST00000556102 USP18Q9UMW8 372 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 MTMR6Q9Y217 621 aa20.24■□□□□ 0.83
CDKN3-209ENST00000556102 SOBPA7XYQ1 873 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 PRR5-ARHGAP8B1AHC4 643 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 CHURC1-FNTBB4DL54 471 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 K7ESF4 209 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 PRPF6O94906 941 aaKnown RBP20.23■□□□□ 0.83
CDKN3-209ENST00000556102 FNTBP49356 437 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 GPR15P49685 360 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 ARHGAP8P85298 464 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 LPAL2Q16609 132 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 INTS6LQ5JSJ4 861 aaKnown RBP20.23■□□□□ 0.83
CDKN3-209ENST00000556102 RALGAPA1Q6GYQ0 2036 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 PRR23BQ6ZRT6 265 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 CCDC65Q8IXS2 484 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 MAB21L3Q8N8X9 362 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 MRPS31Q92665 395 aaKnown RBP20.23■□□□□ 0.83
CDKN3-209ENST00000556102 ZSCAN16Q9H4T2 348 aaPredicted RBP20.23■□□□□ 0.83
CDKN3-209ENST00000556102 PCIF1Q9H4Z3 704 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 KIF9Q9HAQ2 790 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 PDE11AQ9HCR9 933 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 GKN1Q9NS71 199 aa20.23■□□□□ 0.83
CDKN3-209ENST00000556102 MAGED2Q9UNF1 606 aaPredicted RBP20.23■□□□□ 0.83
CDKN3-209ENST00000556102 NCOR2Q9Y618 2525 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 KIAA0391O15091 583 aaKnown RBP20.22■□□□□ 0.83
CDKN3-209ENST00000556102 TMEM191BP0C7N4 346 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 CNR2P34972 360 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 NASPP49321 788 aaPredicted RBP20.22■□□□□ 0.83
CDKN3-209ENST00000556102 RPL10AP62906 217 aaKnown RBP20.22■□□□□ 0.83
CDKN3-209ENST00000556102 RBP5P82980 135 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 DMWDQ09019 674 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 LONP2Q86WA8 852 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 GPD1LQ8N335 351 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 TOP6BLQ8N6T0 577 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 STKLD1Q8NE28 680 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 NOC3LQ8WTT2 800 aaKnown RBP20.22■□□□□ 0.83
CDKN3-209ENST00000556102 USP13Q92995 863 aaPredicted RBP20.22■□□□□ 0.83
CDKN3-209ENST00000556102 FAM84AQ96KN4 292 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 PKMYT1Q99640 499 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 FAM83CQ9BQN1 747 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 MTMR12Q9C0I1 747 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 PARD6AQ9NPB6 346 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 TDP1Q9NUW8 608 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 UXTQ9UBK9 157 aaPredicted RBP20.22■□□□□ 0.83
CDKN3-209ENST00000556102 SIX4Q9UIU6 781 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 CCL26Q9Y258 94 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 SNX9Q9Y5X1 595 aa20.22■□□□□ 0.83
CDKN3-209ENST00000556102 RETP07949 1114 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 KRT19P08727 400 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 ACAT1P24752 427 aaKnown RBP20.21■□□□□ 0.83
CDKN3-209ENST00000556102 SIM2Q14190 667 aaPredicted RBP20.21■□□□□ 0.83
CDKN3-209ENST00000556102 DDR2Q16832 855 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 SDHAF4Q5VUM1 108 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 TXNDC8Q6A555 127 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 SCARA3Q6AZY7 606 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 STXBP4Q6ZWJ1 553 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 MON1AQ86VX9 555 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 OSTM1Q86WC4 334 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 ADGRF2Q8IZF7 708 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 PDILTQ8N807 584 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 ANKRD36BP1Q96IX9 119 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 HPS4Q9NQG7 708 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 ANAPC1Q9H1A4 1944 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 SPTBN2O15020 2390 aa20.21■□□□□ 0.83
CDKN3-209ENST00000556102 ATG2BQ96BY7 2078 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 GREB1Q4ZG55 1949 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 GABRDO14764 452 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 HRO43593 1189 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 STX6O43752 255 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 LRP3O75074 770 aa20.2■□□□□ 0.82
CDKN3-209ENST00000556102 NOL4O94818 638 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms